Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.23□□□□□ -0.13
LMO1P25800 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.23□□□□□ -0.13
LMO1P25800 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.23□□□□□ -0.13
LMO1P25800 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.23□□□□□ -0.13
LMO1P25800 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LMO1P25800 CLEC4GP1-201ENST00000596555 870 ntBASIC14.23□□□□□ -0.13
LMO1P25800 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LMO1P25800 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.23□□□□□ -0.13
LMO1P25800 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.23□□□□□ -0.13
LMO1P25800 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.23□□□□□ -0.13
LMO1P25800 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.23□□□□□ -0.13
LMO1P25800 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.23□□□□□ -0.13
LMO1P25800 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LMO1P25800 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
LMO1P25800 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.23□□□□□ -0.13
LMO1P25800 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.23□□□□□ -0.13
LMO1P25800 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LMO1P25800 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
LMO1P25800 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 CYP2T1P-202ENST00000641596 2535 ntBASIC14.22□□□□□ -0.13
LMO1P25800 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.22□□□□□ -0.13
LMO1P25800 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.22□□□□□ -0.13
LMO1P25800 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LMO1P25800 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LMO1P25800 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LMO1P25800 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LMO1P25800 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.22□□□□□ -0.13
LMO1P25800 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.22□□□□□ -0.13
LMO1P25800 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.22□□□□□ -0.13
LMO1P25800 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.22□□□□□ -0.13
LMO1P25800 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LMO1P25800 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.22□□□□□ -0.13
LMO1P25800 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.22□□□□□ -0.13
LMO1P25800 AC021087.4-201ENST00000563761 564 ntBASIC14.22□□□□□ -0.13
LMO1P25800 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.22□□□□□ -0.13
LMO1P25800 AC013467.2-201ENST00000605472 835 ntBASIC14.22□□□□□ -0.13
LMO1P25800 AC025062.2-201ENST00000605477 670 ntBASIC14.22□□□□□ -0.13
LMO1P25800 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LMO1P25800 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
LMO1P25800 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.22□□□□□ -0.13
LMO1P25800 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
LMO1P25800 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.22□□□□□ -0.13
LMO1P25800 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.22□□□□□ -0.13
LMO1P25800 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LMO1P25800 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
LMO1P25800 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.22□□□□□ -0.13
LMO1P25800 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LMO1P25800 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.22□□□□□ -0.13
LMO1P25800 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LMO1P25800 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LMO1P25800 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.21□□□□□ -0.13
LMO1P25800 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LMO1P25800 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LMO1P25800 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.21□□□□□ -0.13
LMO1P25800 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LMO1P25800 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.21□□□□□ -0.13
LMO1P25800 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.21□□□□□ -0.13
LMO1P25800 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LMO1P25800 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LMO1P25800 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LMO1P25800 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.21□□□□□ -0.13
LMO1P25800 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LMO1P25800 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.21□□□□□ -0.13
LMO1P25800 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LMO1P25800 LAGE3P1-201ENST00000425356 484 ntBASIC14.21□□□□□ -0.13
LMO1P25800 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LMO1P25800 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.21□□□□□ -0.13
LMO1P25800 DUSP5P1-201ENST00000441325 1139 ntBASIC14.21□□□□□ -0.13
LMO1P25800 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LMO1P25800 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.21□□□□□ -0.13
LMO1P25800 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms