Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.6■□□□□ 0.25
BCKDHBP21953 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.6■□□□□ 0.25
BCKDHBP21953 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.6■□□□□ 0.25
BCKDHBP21953 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.6■□□□□ 0.25
BCKDHBP21953 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.6■□□□□ 0.25
BCKDHBP21953 AC008738.7-201ENST00000609744 511 ntBASIC16.6■□□□□ 0.25
BCKDHBP21953 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHBP21953 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.6■□□□□ 0.25
BCKDHBP21953 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.6■□□□□ 0.25
BCKDHBP21953 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHBP21953 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
BCKDHBP21953 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHBP21953 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.6■□□□□ 0.25
BCKDHBP21953 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.6■□□□□ 0.25
BCKDHBP21953 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
BCKDHBP21953 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
BCKDHBP21953 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
BCKDHBP21953 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHBP21953 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.6■□□□□ 0.25
BCKDHBP21953 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
BCKDHBP21953 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHBP21953 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
BCKDHBP21953 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
BCKDHBP21953 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
BCKDHBP21953 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.59■□□□□ 0.25
BCKDHBP21953 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.59■□□□□ 0.25
BCKDHBP21953 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.59■□□□□ 0.25
BCKDHBP21953 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.59■□□□□ 0.25
BCKDHBP21953 KRT17P7-201ENST00000451704 1104 ntBASIC16.59■□□□□ 0.25
BCKDHBP21953 AC009477.1-201ENST00000452936 217 ntBASIC16.59■□□□□ 0.25
BCKDHBP21953 KRT18P34-201ENST00000488218 1270 ntBASIC16.59■□□□□ 0.25
BCKDHBP21953 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.59■□□□□ 0.25
BCKDHBP21953 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.59■□□□□ 0.25
BCKDHBP21953 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.59■□□□□ 0.25
BCKDHBP21953 AC009407.1-201ENST00000568958 598 ntBASIC16.59■□□□□ 0.25
BCKDHBP21953 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.59■□□□□ 0.25
BCKDHBP21953 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
BCKDHBP21953 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.59■□□□□ 0.25
BCKDHBP21953 AC021097.1-201ENST00000607902 574 ntBASIC16.59■□□□□ 0.25
BCKDHBP21953 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.59■□□□□ 0.25
BCKDHBP21953 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.59■□□□□ 0.25
BCKDHBP21953 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
BCKDHBP21953 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.59■□□□□ 0.25
BCKDHBP21953 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
BCKDHBP21953 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
BCKDHBP21953 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.59■□□□□ 0.25
BCKDHBP21953 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.59■□□□□ 0.25
BCKDHBP21953 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BCKDHBP21953 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.59■□□□□ 0.25
BCKDHBP21953 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.58■□□□□ 0.25
BCKDHBP21953 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BCKDHBP21953 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BCKDHBP21953 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BCKDHBP21953 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
BCKDHBP21953 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.58■□□□□ 0.24
BCKDHBP21953 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.58■□□□□ 0.24
BCKDHBP21953 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.58■□□□□ 0.24
BCKDHBP21953 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BCKDHBP21953 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.58■□□□□ 0.24
BCKDHBP21953 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.58■□□□□ 0.24
BCKDHBP21953 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BCKDHBP21953 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.58■□□□□ 0.24
BCKDHBP21953 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.58■□□□□ 0.24
BCKDHBP21953 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BCKDHBP21953 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BCKDHBP21953 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BCKDHBP21953 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.58■□□□□ 0.24
BCKDHBP21953 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BCKDHBP21953 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BCKDHBP21953 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.58■□□□□ 0.24
BCKDHBP21953 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BCKDHBP21953 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BCKDHBP21953 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BCKDHBP21953 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms