Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.9□□□□□ -0.02
ATF1P18846 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.9□□□□□ -0.02
ATF1P18846 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATF1P18846 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATF1P18846 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.9□□□□□ -0.02
ATF1P18846 VENTXP7-201ENST00000475503 772 ntBASIC14.9□□□□□ -0.02
ATF1P18846 STK19B-204ENST00000512515 211 ntBASIC14.9□□□□□ -0.02
ATF1P18846 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ATF1P18846 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.9□□□□□ -0.02
ATF1P18846 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.9□□□□□ -0.02
ATF1P18846 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.9□□□□□ -0.02
ATF1P18846 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATF1P18846 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ATF1P18846 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATF1P18846 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.9□□□□□ -0.02
ATF1P18846 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.9□□□□□ -0.02
ATF1P18846 TSPY26P-202ENST00000565928 3884 ntBASIC14.9□□□□□ -0.02
ATF1P18846 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATF1P18846 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATF1P18846 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATF1P18846 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.9□□□□□ -0.02
ATF1P18846 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.9□□□□□ -0.02
ATF1P18846 MTHFR-217ENST00000641820 1569 ntBASIC14.9□□□□□ -0.02
ATF1P18846 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATF1P18846 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.9□□□□□ -0.02
ATF1P18846 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATF1P18846 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ATF1P18846 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATF1P18846 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATF1P18846 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATF1P18846 FER1L4-210ENST00000615531 5998 ntBASIC14.89□□□□□ -0.03
ATF1P18846 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.89□□□□□ -0.03
ATF1P18846 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATF1P18846 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
ATF1P18846 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.89□□□□□ -0.03
ATF1P18846 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.89□□□□□ -0.03
ATF1P18846 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATF1P18846 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.89□□□□□ -0.03
ATF1P18846 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.89□□□□□ -0.03
ATF1P18846 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATF1P18846 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATF1P18846 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATF1P18846 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.89□□□□□ -0.03
ATF1P18846 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATF1P18846 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.89□□□□□ -0.03
ATF1P18846 TMPOP1-202ENST00000424642 1267 ntBASIC14.89□□□□□ -0.03
ATF1P18846 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATF1P18846 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.89□□□□□ -0.03
ATF1P18846 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.89□□□□□ -0.03
ATF1P18846 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.89□□□□□ -0.03
ATF1P18846 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
ATF1P18846 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATF1P18846 AC068418.2-201ENST00000577309 3703 ntBASIC14.89□□□□□ -0.03
ATF1P18846 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.89□□□□□ -0.03
ATF1P18846 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.89□□□□□ -0.03
ATF1P18846 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATF1P18846 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.89□□□□□ -0.03
ATF1P18846 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.89□□□□□ -0.03
ATF1P18846 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATF1P18846 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.89□□□□□ -0.03
ATF1P18846 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.89□□□□□ -0.03
ATF1P18846 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
ATF1P18846 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.89□□□□□ -0.03
ATF1P18846 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATF1P18846 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATF1P18846 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ATF1P18846 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.89□□□□□ -0.03
ATF1P18846 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.89□□□□□ -0.03
ATF1P18846 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.88□□□□□ -0.03
ATF1P18846 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ATF1P18846 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.88□□□□□ -0.03
ATF1P18846 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ATF1P18846 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.88□□□□□ -0.03
ATF1P18846 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.88□□□□□ -0.03
ATF1P18846 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.88□□□□□ -0.03
ATF1P18846 BX276092.5-203ENST00000456199 560 ntBASIC14.88□□□□□ -0.03
ATF1P18846 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.88□□□□□ -0.03
ATF1P18846 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.88□□□□□ -0.03
ATF1P18846 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.88□□□□□ -0.03
ATF1P18846 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.88□□□□□ -0.03
ATF1P18846 AL121672.3-201ENST00000608644 468 ntBASIC14.88□□□□□ -0.03
ATF1P18846 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ATF1P18846 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms