Protein–RNA interactions for Protein: P18505

GABRB1, Gamma-aminobutyric acid receptor subunit beta-1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1P18505 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.28■□□□□ 0.04
GABRB1P18505 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRB1P18505 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.28■□□□□ 0.04
GABRB1P18505 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.28■□□□□ 0.04
GABRB1P18505 AL021920.2-201ENST00000624828 1351 ntBASIC15.28■□□□□ 0.04
GABRB1P18505 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.28■□□□□ 0.04
GABRB1P18505 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GABRB1P18505 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRB1P18505 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRB1P18505 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRB1P18505 KLF4P1-201ENST00000412782 1185 ntBASIC15.28■□□□□ 0.04
GABRB1P18505 KRT18P38-201ENST00000449496 1282 ntBASIC15.28■□□□□ 0.04
GABRB1P18505 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.28■□□□□ 0.04
GABRB1P18505 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.28■□□□□ 0.04
GABRB1P18505 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRB1P18505 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.28■□□□□ 0.04
GABRB1P18505 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.28■□□□□ 0.04
GABRB1P18505 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.28■□□□□ 0.04
GABRB1P18505 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRB1P18505 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABRB1P18505 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
GABRB1P18505 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GABRB1P18505 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRB1P18505 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRB1P18505 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRB1P18505 GGT4P-201ENST00000623672 1708 ntBASIC15.28■□□□□ 0.04
GABRB1P18505 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABRB1P18505 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRB1P18505 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GABRB1P18505 AC006277.1-201ENST00000624348 1610 ntBASIC15.28■□□□□ 0.04
GABRB1P18505 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABRB1P18505 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRB1P18505 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.27■□□□□ 0.04
GABRB1P18505 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.27■□□□□ 0.04
GABRB1P18505 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
GABRB1P18505 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.27■□□□□ 0.04
GABRB1P18505 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.27■□□□□ 0.04
GABRB1P18505 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
GABRB1P18505 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABRB1P18505 NUS1P1-201ENST00000446295 882 ntBASIC15.27■□□□□ 0.04
GABRB1P18505 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.27■□□□□ 0.04
GABRB1P18505 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.27■□□□□ 0.04
GABRB1P18505 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.27■□□□□ 0.04
GABRB1P18505 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.27■□□□□ 0.04
GABRB1P18505 AC145285.6-201ENST00000604632 637 ntBASIC15.27■□□□□ 0.04
GABRB1P18505 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
GABRB1P18505 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GABRB1P18505 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.27■□□□□ 0.03
GABRB1P18505 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
GABRB1P18505 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GABRB1P18505 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GABRB1P18505 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GABRB1P18505 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GABRB1P18505 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
GABRB1P18505 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.27■□□□□ 0.03
GABRB1P18505 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
GABRB1P18505 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GABRB1P18505 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GABRB1P18505 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GABRB1P18505 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
GABRB1P18505 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.26■□□□□ 0.03
GABRB1P18505 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.26■□□□□ 0.03
GABRB1P18505 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.26■□□□□ 0.03
GABRB1P18505 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRB1P18505 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRB1P18505 AC022532.1-201ENST00000624563 1728 ntBASIC15.26■□□□□ 0.03
GABRB1P18505 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRB1P18505 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRB1P18505 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRB1P18505 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRB1P18505 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
GABRB1P18505 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRB1P18505 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GABRB1P18505 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.26■□□□□ 0.03
GABRB1P18505 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.26■□□□□ 0.03
GABRB1P18505 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRB1P18505 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRB1P18505 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRB1P18505 ACTG1P4-201ENST00000425123 1122 ntBASIC15.26■□□□□ 0.03
GABRB1P18505 YBX1P2-201ENST00000489612 999 ntBASIC15.26■□□□□ 0.03
GABRB1P18505 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms