Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AC103702.1-201ENST00000548801 2630 ntBASIC17.08■□□□□ 0.32
VCLP18206 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
VCLP18206 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VCLP18206 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VCLP18206 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.08■□□□□ 0.32
VCLP18206 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCLP18206 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.07■□□□□ 0.32
VCLP18206 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCLP18206 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCLP18206 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCLP18206 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
VCLP18206 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCLP18206 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.07■□□□□ 0.32
VCLP18206 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
VCLP18206 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCLP18206 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
VCLP18206 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VCLP18206 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCLP18206 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.07■□□□□ 0.32
VCLP18206 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.07■□□□□ 0.32
VCLP18206 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.07■□□□□ 0.32
VCLP18206 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.07■□□□□ 0.32
VCLP18206 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VCLP18206 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCLP18206 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.07■□□□□ 0.32
VCLP18206 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCLP18206 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
VCLP18206 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.07■□□□□ 0.32
VCLP18206 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCLP18206 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCLP18206 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.07■□□□□ 0.32
VCLP18206 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.07■□□□□ 0.32
VCLP18206 AC116353.5-201ENST00000638148 1699 ntBASIC17.07■□□□□ 0.32
VCLP18206 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VCLP18206 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCLP18206 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.06■□□□□ 0.32
VCLP18206 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.06■□□□□ 0.32
VCLP18206 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VCLP18206 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
VCLP18206 AC097637.2-201ENST00000624096 1997 ntBASIC17.06■□□□□ 0.32
VCLP18206 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
VCLP18206 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
VCLP18206 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.06■□□□□ 0.32
VCLP18206 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.06■□□□□ 0.32
VCLP18206 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.06■□□□□ 0.32
VCLP18206 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.06■□□□□ 0.32
VCLP18206 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.06■□□□□ 0.32
VCLP18206 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.06■□□□□ 0.32
VCLP18206 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.06■□□□□ 0.32
VCLP18206 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.06■□□□□ 0.32
VCLP18206 AC105339.3-201ENST00000560043 636 ntBASIC17.06■□□□□ 0.32
VCLP18206 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.06■□□□□ 0.32
VCLP18206 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.06■□□□□ 0.32
VCLP18206 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.06■□□□□ 0.32
VCLP18206 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
VCLP18206 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.06■□□□□ 0.32
VCLP18206 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.06■□□□□ 0.32
VCLP18206 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.06■□□□□ 0.32
VCLP18206 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VCLP18206 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
VCLP18206 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.06■□□□□ 0.32
VCLP18206 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.06■□□□□ 0.32
VCLP18206 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.06■□□□□ 0.32
VCLP18206 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VCLP18206 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VCLP18206 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
VCLP18206 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.06■□□□□ 0.32
VCLP18206 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.06■□□□□ 0.32
VCLP18206 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VCLP18206 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCLP18206 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
VCLP18206 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.05■□□□□ 0.32
VCLP18206 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VCLP18206 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCLP18206 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms