Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GAP43P17677 AL590627.1-203ENST00000421194 1026 ntBASIC18.63■□□□□ 0.57
GAP43P17677 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GAP43P17677 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.63■□□□□ 0.57
GAP43P17677 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.63■□□□□ 0.57
GAP43P17677 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.63■□□□□ 0.57
GAP43P17677 AC087641.1-201ENST00000557561 1021 ntBASIC18.63■□□□□ 0.57
GAP43P17677 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GAP43P17677 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.63■□□□□ 0.57
GAP43P17677 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GAP43P17677 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GAP43P17677 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GAP43P17677 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.63■□□□□ 0.57
GAP43P17677 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.63■□□□□ 0.57
GAP43P17677 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GAP43P17677 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GAP43P17677 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GAP43P17677 AC104109.2-201ENST00000602919 1418 ntBASIC18.63■□□□□ 0.57
GAP43P17677 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GAP43P17677 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
GAP43P17677 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GAP43P17677 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.63■□□□□ 0.57
GAP43P17677 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.63■□□□□ 0.57
GAP43P17677 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
GAP43P17677 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.63■□□□□ 0.57
GAP43P17677 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GAP43P17677 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GAP43P17677 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GAP43P17677 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GAP43P17677 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.62■□□□□ 0.57
GAP43P17677 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GAP43P17677 FLJ38576-201ENST00000623820 2459 ntBASIC18.62■□□□□ 0.57
GAP43P17677 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.62■□□□□ 0.57
GAP43P17677 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GAP43P17677 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.62■□□□□ 0.57
GAP43P17677 HCG4B-203ENST00000450128 991 ntBASIC18.62■□□□□ 0.57
GAP43P17677 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
GAP43P17677 RPL13AP23-201ENST00000480739 586 ntBASIC18.62■□□□□ 0.57
GAP43P17677 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.62■□□□□ 0.57
GAP43P17677 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.62■□□□□ 0.57
GAP43P17677 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GAP43P17677 AC034105.1-201ENST00000563488 319 ntBASIC18.62■□□□□ 0.57
GAP43P17677 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.62■□□□□ 0.57
GAP43P17677 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
GAP43P17677 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
GAP43P17677 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.62■□□□□ 0.57
GAP43P17677 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GAP43P17677 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.62■□□□□ 0.57
GAP43P17677 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GAP43P17677 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.62■□□□□ 0.57
GAP43P17677 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GAP43P17677 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GAP43P17677 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.62■□□□□ 0.57
GAP43P17677 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.62■□□□□ 0.57
GAP43P17677 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GAP43P17677 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.62■□□□□ 0.57
GAP43P17677 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GAP43P17677 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.62■□□□□ 0.57
GAP43P17677 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GAP43P17677 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GAP43P17677 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GAP43P17677 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.61■□□□□ 0.57
GAP43P17677 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GAP43P17677 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
GAP43P17677 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
GAP43P17677 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GAP43P17677 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.61■□□□□ 0.57
GAP43P17677 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GAP43P17677 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GAP43P17677 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GAP43P17677 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GAP43P17677 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
GAP43P17677 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GAP43P17677 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GAP43P17677 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.61■□□□□ 0.57
GAP43P17677 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.61■□□□□ 0.57
GAP43P17677 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
GAP43P17677 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GAP43P17677 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GAP43P17677 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GAP43P17677 IGLL3P-201ENST00000412472 434 ntBASIC18.61■□□□□ 0.57
GAP43P17677 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.61■□□□□ 0.57
GAP43P17677 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.61■□□□□ 0.57
GAP43P17677 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.61■□□□□ 0.57
GAP43P17677 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.61■□□□□ 0.57
GAP43P17677 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GAP43P17677 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.61■□□□□ 0.57
GAP43P17677 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.61■□□□□ 0.57
GAP43P17677 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.61■□□□□ 0.57
GAP43P17677 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.61■□□□□ 0.57
GAP43P17677 CYP2A7P1-201ENST00000595391 815 ntBASIC18.61■□□□□ 0.57
GAP43P17677 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.61■□□□□ 0.57
GAP43P17677 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
GAP43P17677 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GAP43P17677 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
GAP43P17677 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GAP43P17677 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.61■□□□□ 0.57
GAP43P17677 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GAP43P17677 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GAP43P17677 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms