Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCK1P16333 FAM220CP-201ENST00000395253 831 ntBASIC16.04■□□□□ 0.16
NCK1P16333 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.04■□□□□ 0.16
NCK1P16333 AC117947.1-201ENST00000427448 529 ntBASIC16.04■□□□□ 0.16
NCK1P16333 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.04■□□□□ 0.16
NCK1P16333 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.04■□□□□ 0.16
NCK1P16333 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.04■□□□□ 0.16
NCK1P16333 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCK1P16333 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NCK1P16333 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCK1P16333 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCK1P16333 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCK1P16333 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.04■□□□□ 0.16
NCK1P16333 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCK1P16333 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NCK1P16333 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
NCK1P16333 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCK1P16333 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCK1P16333 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NCK1P16333 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.04■□□□□ 0.16
NCK1P16333 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCK1P16333 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.04■□□□□ 0.16
NCK1P16333 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.04■□□□□ 0.16
NCK1P16333 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCK1P16333 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.03■□□□□ 0.16
NCK1P16333 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.03■□□□□ 0.16
NCK1P16333 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.03■□□□□ 0.16
NCK1P16333 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.03■□□□□ 0.16
NCK1P16333 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.03■□□□□ 0.16
NCK1P16333 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.03■□□□□ 0.16
NCK1P16333 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
NCK1P16333 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 AC087499.1-201ENST00000418141 1075 ntBASIC16.03■□□□□ 0.16
NCK1P16333 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.03■□□□□ 0.16
NCK1P16333 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.03■□□□□ 0.16
NCK1P16333 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.03■□□□□ 0.16
NCK1P16333 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
NCK1P16333 HYMAI.1-201ENST00000620949 238 ntBASIC16.03■□□□□ 0.16
NCK1P16333 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.03■□□□□ 0.16
NCK1P16333 TMEM191A-211ENST00000637163 1067 ntBASIC16.03■□□□□ 0.16
NCK1P16333 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 ME2P1-201ENST00000426028 1970 ntBASIC16.03■□□□□ 0.16
NCK1P16333 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NCK1P16333 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.03■□□□□ 0.16
NCK1P16333 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NCK1P16333 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 AC132938.5-201ENST00000624980 1813 ntBASIC16.03■□□□□ 0.16
NCK1P16333 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.03■□□□□ 0.16
NCK1P16333 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.03■□□□□ 0.16
NCK1P16333 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.03■□□□□ 0.16
NCK1P16333 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NCK1P16333 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
NCK1P16333 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NCK1P16333 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.02■□□□□ 0.16
NCK1P16333 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 DBET-201ENST00000630918 3363 ntBASIC16.02■□□□□ 0.16
NCK1P16333 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.02■□□□□ 0.16
NCK1P16333 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NCK1P16333 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
NCK1P16333 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.02■□□□□ 0.16
NCK1P16333 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
NCK1P16333 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.02■□□□□ 0.16
NCK1P16333 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
NCK1P16333 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 GUSBP12-201ENST00000513727 720 ntBASIC16.02■□□□□ 0.16
NCK1P16333 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.02■□□□□ 0.16
NCK1P16333 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCK1P16333 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.02■□□□□ 0.16
NCK1P16333 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms