Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FREM3P0C091 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FREM3P0C091 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FREM3P0C091 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
FREM3P0C091 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.34■□□□□ 0.05
FREM3P0C091 CXCL1P1-201ENST00000502804 216 ntBASIC15.34■□□□□ 0.05
FREM3P0C091 AP000344.2-201ENST00000512987 629 ntBASIC15.34■□□□□ 0.05
FREM3P0C091 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.34■□□□□ 0.05
FREM3P0C091 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.34■□□□□ 0.05
FREM3P0C091 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.34■□□□□ 0.05
FREM3P0C091 AL135744.1-201ENST00000565098 629 ntBASIC15.34■□□□□ 0.05
FREM3P0C091 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.34■□□□□ 0.05
FREM3P0C091 ACTL9-202ENST00000612068 1252 ntBASIC15.34■□□□□ 0.05
FREM3P0C091 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
FREM3P0C091 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FREM3P0C091 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
FREM3P0C091 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
FREM3P0C091 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.33■□□□□ 0.05
FREM3P0C091 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
FREM3P0C091 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.33■□□□□ 0.05
FREM3P0C091 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
FREM3P0C091 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
FREM3P0C091 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.33■□□□□ 0.05
FREM3P0C091 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.33■□□□□ 0.04
FREM3P0C091 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.33■□□□□ 0.04
FREM3P0C091 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.33■□□□□ 0.04
FREM3P0C091 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.33■□□□□ 0.04
FREM3P0C091 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.33■□□□□ 0.04
FREM3P0C091 AC005829.1-201ENST00000570002 483 ntBASIC15.33■□□□□ 0.04
FREM3P0C091 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
FREM3P0C091 AL009183.1-201ENST00000603760 355 ntBASIC15.33■□□□□ 0.04
FREM3P0C091 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
FREM3P0C091 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.33■□□□□ 0.04
FREM3P0C091 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.33■□□□□ 0.04
FREM3P0C091 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.33■□□□□ 0.04
FREM3P0C091 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.33■□□□□ 0.04
FREM3P0C091 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
FREM3P0C091 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FREM3P0C091 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
FREM3P0C091 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM3P0C091 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM3P0C091 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM3P0C091 CNN2P11-201ENST00000429351 262 ntBASIC15.32■□□□□ 0.04
FREM3P0C091 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.32■□□□□ 0.04
FREM3P0C091 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
FREM3P0C091 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.32■□□□□ 0.04
FREM3P0C091 AL596442.2-201ENST00000610240 980 ntBASIC15.32■□□□□ 0.04
FREM3P0C091 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.32■□□□□ 0.04
FREM3P0C091 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FREM3P0C091 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FREM3P0C091 BCAR1-209ENST00000546196 1340 ntBASIC15.32■□□□□ 0.04
FREM3P0C091 AC090340.1-201ENST00000620778 4980 ntBASIC15.32■□□□□ 0.04
FREM3P0C091 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM3P0C091 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM3P0C091 AC106886.4-201ENST00000623557 2502 ntBASIC15.32■□□□□ 0.04
FREM3P0C091 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM3P0C091 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
FREM3P0C091 AC092053.1-201ENST00000605787 1936 ntBASIC15.32■□□□□ 0.04
FREM3P0C091 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FREM3P0C091 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.32■□□□□ 0.04
FREM3P0C091 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM3P0C091 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.32■□□□□ 0.04
FREM3P0C091 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FREM3P0C091 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM3P0C091 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
FREM3P0C091 TSEN15P1-201ENST00000423257 515 ntBASIC15.32■□□□□ 0.04
FREM3P0C091 AC140658.5-201ENST00000438532 169 ntBASIC15.32■□□□□ 0.04
FREM3P0C091 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.32■□□□□ 0.04
FREM3P0C091 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.32■□□□□ 0.04
FREM3P0C091 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.32■□□□□ 0.04
FREM3P0C091 AL031432.2-201ENST00000566714 459 ntBASIC15.32■□□□□ 0.04
FREM3P0C091 AL928711.1-201ENST00000570165 459 ntBASIC15.32■□□□□ 0.04
FREM3P0C091 MIR3687-2-201ENST00000577708 61 ntBASIC15.32■□□□□ 0.04
FREM3P0C091 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM3P0C091 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.32■□□□□ 0.04
FREM3P0C091 MIR3687-1-201ENST00000614492 61 ntBASIC15.32■□□□□ 0.04
FREM3P0C091 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM3P0C091 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FREM3P0C091 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
FREM3P0C091 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM3P0C091 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms