Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
HOXC6P09630 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC6P09630 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC6P09630 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC6P09630 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
HOXC6P09630 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC6P09630 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC6P09630 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC6P09630 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.97■□□□□ 0.63
HOXC6P09630 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.97■□□□□ 0.63
HOXC6P09630 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.97■□□□□ 0.63
HOXC6P09630 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HOXC6P09630 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXC6P09630 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.97■□□□□ 0.63
HOXC6P09630 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC6P09630 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC6P09630 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC6P09630 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC6P09630 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC6P09630 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
HOXC6P09630 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HOXC6P09630 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC6P09630 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXC6P09630 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC6P09630 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC6P09630 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC6P09630 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HOXC6P09630 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HOXC6P09630 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
HOXC6P09630 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC6P09630 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXC6P09630 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC6P09630 FOXO1B-201ENST00000504678 1527 ntBASIC18.96■□□□□ 0.63
HOXC6P09630 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC6P09630 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC6P09630 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC6P09630 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC6P09630 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC6P09630 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC6P09630 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC6P09630 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HOXC6P09630 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.96■□□□□ 0.63
HOXC6P09630 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.96■□□□□ 0.63
HOXC6P09630 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXC6P09630 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.96■□□□□ 0.63
HOXC6P09630 KRT18P34-201ENST00000488218 1270 ntBASIC18.96■□□□□ 0.63
HOXC6P09630 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.96■□□□□ 0.63
HOXC6P09630 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXC6P09630 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.96■□□□□ 0.63
HOXC6P09630 LINC00896-202ENST00000609602 2128 ntBASIC18.96■□□□□ 0.63
HOXC6P09630 AC003101.2-201ENST00000612557 442 ntBASIC18.96■□□□□ 0.63
HOXC6P09630 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC6P09630 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXC6P09630 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
HOXC6P09630 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC6P09630 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC6P09630 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.95■□□□□ 0.62
HOXC6P09630 AL035456.1-201ENST00000456064 1369 ntBASIC18.95■□□□□ 0.62
HOXC6P09630 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.95■□□□□ 0.62
HOXC6P09630 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HOXC6P09630 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXC6P09630 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
HOXC6P09630 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
HOXC6P09630 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HOXC6P09630 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.95■□□□□ 0.62
HOXC6P09630 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.95■□□□□ 0.62
HOXC6P09630 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.95■□□□□ 0.62
HOXC6P09630 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.95■□□□□ 0.62
HOXC6P09630 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.95■□□□□ 0.62
HOXC6P09630 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HOXC6P09630 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.95■□□□□ 0.62
HOXC6P09630 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.95■□□□□ 0.62
HOXC6P09630 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.95■□□□□ 0.62
HOXC6P09630 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.95■□□□□ 0.62
HOXC6P09630 AC004233.3-201ENST00000607794 1269 ntBASIC18.95■□□□□ 0.62
HOXC6P09630 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXC6P09630 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXC6P09630 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.95■□□□□ 0.62
HOXC6P09630 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXC6P09630 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXC6P09630 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HOXC6P09630 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HOXC6P09630 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC6P09630 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.94■□□□□ 0.62
HOXC6P09630 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
HOXC6P09630 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.94■□□□□ 0.62
HOXC6P09630 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC6P09630 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.94■□□□□ 0.62
HOXC6P09630 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.94■□□□□ 0.62
HOXC6P09630 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC6P09630 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC6P09630 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
HOXC6P09630 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.94■□□□□ 0.62
HOXC6P09630 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC6P09630 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.94■□□□□ 0.62
HOXC6P09630 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.94■□□□□ 0.62
HOXC6P09630 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.94■□□□□ 0.62
HOXC6P09630 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
HOXC6P09630 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC6P09630 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms