Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM2P07951 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM2P07951 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TPM2P07951 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TPM2P07951 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC19.32■□□□□ 0.68
TPM2P07951 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM2P07951 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TPM2P07951 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM2P07951 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM2P07951 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.32■□□□□ 0.68
TPM2P07951 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TPM2P07951 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.32■□□□□ 0.68
TPM2P07951 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.32■□□□□ 0.68
TPM2P07951 AC011558.1-201ENST00000623459 338 ntBASIC19.32■□□□□ 0.68
TPM2P07951 TNRC18P2-201ENST00000417666 2714 ntBASIC19.32■□□□□ 0.68
TPM2P07951 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM2P07951 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM2P07951 LINC01311-201ENST00000565162 1445 ntBASIC19.32■□□□□ 0.68
TPM2P07951 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM2P07951 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM2P07951 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM2P07951 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
TPM2P07951 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM2P07951 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM2P07951 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.32■□□□□ 0.68
TPM2P07951 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM2P07951 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM2P07951 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM2P07951 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TPM2P07951 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM2P07951 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.31■□□□□ 0.68
TPM2P07951 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM2P07951 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TPM2P07951 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TPM2P07951 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TPM2P07951 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TPM2P07951 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM2P07951 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TPM2P07951 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM2P07951 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.31■□□□□ 0.68
TPM2P07951 YBX1P2-201ENST00000489612 999 ntBASIC19.31■□□□□ 0.68
TPM2P07951 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TPM2P07951 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM2P07951 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM2P07951 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM2P07951 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TPM2P07951 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.31■□□□□ 0.68
TPM2P07951 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM2P07951 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC19.31■□□□□ 0.68
TPM2P07951 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM2P07951 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TPM2P07951 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TPM2P07951 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.3■□□□□ 0.68
TPM2P07951 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.3■□□□□ 0.68
TPM2P07951 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC19.3■□□□□ 0.68
TPM2P07951 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TPM2P07951 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.3■□□□□ 0.68
TPM2P07951 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.3■□□□□ 0.68
TPM2P07951 AC113347.1-201ENST00000413321 391 ntBASIC19.3■□□□□ 0.68
TPM2P07951 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.3■□□□□ 0.68
TPM2P07951 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 HOMER2P1-201ENST00000455653 964 ntBASIC19.3■□□□□ 0.68
TPM2P07951 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.3■□□□□ 0.68
TPM2P07951 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.3■□□□□ 0.68
TPM2P07951 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TPM2P07951 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.3■□□□□ 0.68
TPM2P07951 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.3■□□□□ 0.68
TPM2P07951 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 AC139887.4-201ENST00000607877 719 ntBASIC19.3■□□□□ 0.68
TPM2P07951 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TPM2P07951 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
TPM2P07951 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.3■□□□□ 0.68
TPM2P07951 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TPM2P07951 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.3■□□□□ 0.68
TPM2P07951 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM2P07951 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM2P07951 CICP4-201ENST00000447359 2812 ntBASIC19.29■□□□□ 0.68
TPM2P07951 AC092171.3-201ENST00000610122 2651 ntBASIC19.29■□□□□ 0.68
TPM2P07951 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM2P07951 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM2P07951 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM2P07951 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms