Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 AP002490.2-201ENST00000524791 560 ntBASIC15.27■□□□□ 0.04
HLA-DPB1P04440 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 AC090616.6-201ENST00000582640 721 ntBASIC15.27■□□□□ 0.04
HLA-DPB1P04440 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 AC091076.1-201ENST00000610741 619 ntBASIC15.27■□□□□ 0.04
HLA-DPB1P04440 AL592071.1-201ENST00000611956 408 ntBASIC15.27■□□□□ 0.04
HLA-DPB1P04440 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DPB1P04440 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.27■□□□□ 0.04
HLA-DPB1P04440 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
HLA-DPB1P04440 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.27■□□□□ 0.03
HLA-DPB1P04440 AL513477.1-201ENST00000602865 2407 ntBASIC15.27■□□□□ 0.03
HLA-DPB1P04440 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
HLA-DPB1P04440 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.27■□□□□ 0.03
HLA-DPB1P04440 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPB1P04440 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPB1P04440 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPB1P04440 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPB1P04440 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
HLA-DPB1P04440 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPB1P04440 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 TSSC2-201ENST00000450217 709 ntBASIC15.26■□□□□ 0.03
HLA-DPB1P04440 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 MST1L-201ENST00000442552 2185 ntBASIC15.26■□□□□ 0.03
HLA-DPB1P04440 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 LINC00554-201ENST00000564841 3011 ntBASIC15.26■□□□□ 0.03
HLA-DPB1P04440 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DPB1P04440 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 EGFEM1P-202ENST00000431685 1563 ntBASIC15.25■□□□□ 0.03
HLA-DPB1P04440 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms