Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
APOBP04114 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
APOBP04114 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC10.37□□□□□ -0.75
APOBP04114 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
APOBP04114 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC10.36□□□□□ -0.75
APOBP04114 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOBP04114 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC10.36□□□□□ -0.75
APOBP04114 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC10.36□□□□□ -0.75
APOBP04114 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC10.36□□□□□ -0.75
APOBP04114 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC10.36□□□□□ -0.75
APOBP04114 AC061975.2-201ENST00000581722 295 ntBASIC10.36□□□□□ -0.75
APOBP04114 AL158212.4-201ENST00000624062 1286 ntBASIC10.36□□□□□ -0.75
APOBP04114 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
APOBP04114 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
APOBP04114 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
APOBP04114 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
APOBP04114 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
APOBP04114 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOBP04114 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC10.36□□□□□ -0.75
APOBP04114 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOBP04114 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC10.36□□□□□ -0.75
APOBP04114 RPL28-204ENST00000431533 590 ntTSL 2 BASIC10.36□□□□□ -0.75
APOBP04114 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOBP04114 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC10.36□□□□□ -0.75
APOBP04114 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
APOBP04114 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOBP04114 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC10.36□□□□□ -0.75
APOBP04114 RPL7P3-201ENST00000441388 714 ntBASIC10.36□□□□□ -0.75
APOBP04114 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOBP04114 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC10.36□□□□□ -0.75
APOBP04114 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC10.36□□□□□ -0.75
APOBP04114 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
APOBP04114 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC10.36□□□□□ -0.75
APOBP04114 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOBP04114 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
APOBP04114 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
APOBP04114 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC10.36□□□□□ -0.75
APOBP04114 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC10.36□□□□□ -0.75
APOBP04114 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
APOBP04114 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOBP04114 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC10.36□□□□□ -0.75
APOBP04114 FXNP2-201ENST00000411625 547 ntBASIC10.36□□□□□ -0.75
APOBP04114 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC10.36□□□□□ -0.75
APOBP04114 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC10.36□□□□□ -0.75
APOBP04114 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC10.36□□□□□ -0.75
APOBP04114 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOBP04114 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
APOBP04114 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC10.35□□□□□ -0.75
APOBP04114 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
APOBP04114 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC10.35□□□□□ -0.75
APOBP04114 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC10.35□□□□□ -0.75
APOBP04114 AL353705.2-201ENST00000428243 662 ntBASIC10.35□□□□□ -0.75
APOBP04114 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC10.35□□□□□ -0.75
APOBP04114 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC10.35□□□□□ -0.75
APOBP04114 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC10.35□□□□□ -0.75
APOBP04114 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC10.35□□□□□ -0.75
APOBP04114 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
APOBP04114 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC10.35□□□□□ -0.75
APOBP04114 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
APOBP04114 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC10.35□□□□□ -0.75
APOBP04114 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
APOBP04114 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 HLA-H-201ENST00000383620 1096 ntBASIC10.35□□□□□ -0.75
APOBP04114 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC10.35□□□□□ -0.75
APOBP04114 FO681548.1-201ENST00000455617 1132 ntBASIC10.35□□□□□ -0.75
APOBP04114 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC10.35□□□□□ -0.75
APOBP04114 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC10.35□□□□□ -0.75
APOBP04114 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
APOBP04114 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC10.35□□□□□ -0.75
APOBP04114 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC10.35□□□□□ -0.75
APOBP04114 FLJ13224-201ENST00000313737 1514 ntBASIC10.35□□□□□ -0.75
APOBP04114 KRT8P12-202ENST00000472924 1397 ntBASIC10.35□□□□□ -0.75
APOBP04114 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC10.35□□□□□ -0.75
APOBP04114 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC10.35□□□□□ -0.75
APOBP04114 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
APOBP04114 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC10.35□□□□□ -0.75
APOBP04114 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
APOBP04114 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 C2orf69P2-201ENST00000562032 1123 ntBASIC10.35□□□□□ -0.75
APOBP04114 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC10.35□□□□□ -0.75
APOBP04114 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC10.35□□□□□ -0.75
APOBP04114 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms