Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.03■□□□□ 0.16
MT-ND1P03886 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.03■□□□□ 0.16
MT-ND1P03886 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
MT-ND1P03886 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
MT-ND1P03886 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
MT-ND1P03886 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
MT-ND1P03886 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
MT-ND1P03886 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
MT-ND1P03886 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
MT-ND1P03886 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND1P03886 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
MT-ND1P03886 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
MT-ND1P03886 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND1P03886 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND1P03886 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND1P03886 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND1P03886 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND1P03886 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND1P03886 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
MT-ND1P03886 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND1P03886 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.02■□□□□ 0.16
MT-ND1P03886 AC007967.3-201ENST00000434308 558 ntBASIC16.02■□□□□ 0.16
MT-ND1P03886 AC104076.2-201ENST00000448912 469 ntBASIC16.02■□□□□ 0.16
MT-ND1P03886 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND1P03886 AC063952.2-201ENST00000498792 1227 ntBASIC16.02■□□□□ 0.16
MT-ND1P03886 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.02■□□□□ 0.16
MT-ND1P03886 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.02■□□□□ 0.16
MT-ND1P03886 RNF126P1-202ENST00000569893 925 ntBASIC16.02■□□□□ 0.16
MT-ND1P03886 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.02■□□□□ 0.16
MT-ND1P03886 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.02■□□□□ 0.16
MT-ND1P03886 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.02■□□□□ 0.16
MT-ND1P03886 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.02■□□□□ 0.16
MT-ND1P03886 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
MT-ND1P03886 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
MT-ND1P03886 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MT-ND1P03886 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
MT-ND1P03886 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
MT-ND1P03886 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MT-ND1P03886 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MT-ND1P03886 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
MT-ND1P03886 AC023824.1-201ENST00000562945 2975 ntBASIC16.02■□□□□ 0.15
MT-ND1P03886 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MT-ND1P03886 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MT-ND1P03886 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
MT-ND1P03886 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
MT-ND1P03886 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
MT-ND1P03886 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.01■□□□□ 0.15
MT-ND1P03886 AL365203.3-201ENST00000609742 2057 ntBASIC16.01■□□□□ 0.15
MT-ND1P03886 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND1P03886 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND1P03886 AC097374.2-201ENST00000618617 1306 ntBASIC16.01■□□□□ 0.15
MT-ND1P03886 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND1P03886 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND1P03886 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.01■□□□□ 0.15
MT-ND1P03886 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND1P03886 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND1P03886 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
MT-ND1P03886 AC092850.2-201ENST00000623821 2697 ntBASIC16.01■□□□□ 0.15
MT-ND1P03886 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND1P03886 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.01■□□□□ 0.15
MT-ND1P03886 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.01■□□□□ 0.15
MT-ND1P03886 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND1P03886 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.01■□□□□ 0.15
MT-ND1P03886 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND1P03886 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.01■□□□□ 0.15
MT-ND1P03886 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.01■□□□□ 0.15
MT-ND1P03886 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.01■□□□□ 0.15
MT-ND1P03886 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.01■□□□□ 0.15
MT-ND1P03886 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND1P03886 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.01■□□□□ 0.15
MT-ND1P03886 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
MT-ND1P03886 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
MT-ND1P03886 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
MT-ND1P03886 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.01■□□□□ 0.15
MT-ND1P03886 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND1P03886 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND1P03886 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND1P03886 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND1P03886 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
MT-ND1P03886 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND1P03886 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.01■□□□□ 0.15
MT-ND1P03886 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.01■□□□□ 0.15
MT-ND1P03886 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
MT-ND1P03886 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16■□□□□ 0.15
MT-ND1P03886 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16■□□□□ 0.15
MT-ND1P03886 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND1P03886 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND1P03886 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16■□□□□ 0.15
MT-ND1P03886 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND1P03886 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16■□□□□ 0.15
MT-ND1P03886 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
MT-ND1P03886 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND1P03886 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16■□□□□ 0.15
MT-ND1P03886 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND1P03886 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms