Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CD4P01730 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD4P01730 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CD4P01730 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CD4P01730 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CD4P01730 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.61■□□□□ 0.57
CD4P01730 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD4P01730 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CD4P01730 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.6■□□□□ 0.57
CD4P01730 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CD4P01730 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CD4P01730 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.6■□□□□ 0.57
CD4P01730 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD4P01730 AL138688.1-201ENST00000624851 1594 ntBASIC18.6■□□□□ 0.57
CD4P01730 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.6■□□□□ 0.57
CD4P01730 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CD4P01730 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD4P01730 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD4P01730 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD4P01730 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.6■□□□□ 0.57
CD4P01730 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CD4P01730 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.6■□□□□ 0.57
CD4P01730 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.6■□□□□ 0.57
CD4P01730 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.6■□□□□ 0.57
CD4P01730 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CD4P01730 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.6■□□□□ 0.57
CD4P01730 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.6■□□□□ 0.57
CD4P01730 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
CD4P01730 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD4P01730 SLC22A20-204ENST00000530038 1673 ntBASIC18.6■□□□□ 0.57
CD4P01730 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD4P01730 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD4P01730 AC016396.2-201ENST00000562575 1417 ntBASIC18.59■□□□□ 0.57
CD4P01730 AC100757.3-201ENST00000622361 1406 ntBASIC18.59■□□□□ 0.57
CD4P01730 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CD4P01730 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD4P01730 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD4P01730 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.59■□□□□ 0.57
CD4P01730 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CD4P01730 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD4P01730 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD4P01730 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD4P01730 OR8S1-201ENST00000310194 1080 ntBASIC18.59■□□□□ 0.57
CD4P01730 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD4P01730 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CD4P01730 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.59■□□□□ 0.57
CD4P01730 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD4P01730 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD4P01730 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.59■□□□□ 0.57
CD4P01730 AC007274.1-201ENST00000439805 662 ntBASIC18.59■□□□□ 0.57
CD4P01730 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.59■□□□□ 0.57
CD4P01730 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.59■□□□□ 0.57
CD4P01730 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.59■□□□□ 0.57
CD4P01730 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CD4P01730 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.59■□□□□ 0.57
CD4P01730 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.59■□□□□ 0.57
CD4P01730 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.59■□□□□ 0.57
CD4P01730 AC009118.2-201ENST00000613275 655 ntBASIC18.59■□□□□ 0.57
CD4P01730 AC073592.8-201ENST00000624126 511 ntBASIC18.59■□□□□ 0.57
CD4P01730 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.59■□□□□ 0.57
CD4P01730 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD4P01730 AC018470.1-201ENST00000624790 3129 ntBASIC18.59■□□□□ 0.57
CD4P01730 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.59■□□□□ 0.57
CD4P01730 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD4P01730 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD4P01730 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD4P01730 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.59■□□□□ 0.57
CD4P01730 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD4P01730 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD4P01730 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD4P01730 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD4P01730 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CD4P01730 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD4P01730 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.58■□□□□ 0.57
CD4P01730 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD4P01730 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD4P01730 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.58■□□□□ 0.57
CD4P01730 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD4P01730 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD4P01730 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD4P01730 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.58■□□□□ 0.56
CD4P01730 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.58■□□□□ 0.56
CD4P01730 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.58■□□□□ 0.56
CD4P01730 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.58■□□□□ 0.56
CD4P01730 AC027369.6-201ENST00000525520 931 ntBASIC18.58■□□□□ 0.56
CD4P01730 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.58■□□□□ 0.56
CD4P01730 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD4P01730 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD4P01730 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.58■□□□□ 0.56
CD4P01730 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
CD4P01730 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CD4P01730 AL008721.1-201ENST00000609964 604 ntBASIC18.58■□□□□ 0.56
CD4P01730 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.58■□□□□ 0.56
CD4P01730 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD4P01730 AC068880.1-201ENST00000507289 2297 ntBASIC18.58■□□□□ 0.56
CD4P01730 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.58■□□□□ 0.56
CD4P01730 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD4P01730 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.58■□□□□ 0.56
CD4P01730 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD4P01730 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms