Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
MT-CO1P00395 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
MT-CO1P00395 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.35■□□□□ 0.37
MT-CO1P00395 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.35■□□□□ 0.37
MT-CO1P00395 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-CO1P00395 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-CO1P00395 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.35■□□□□ 0.37
MT-CO1P00395 AC092053.1-201ENST00000605787 1936 ntBASIC17.35■□□□□ 0.37
MT-CO1P00395 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.35■□□□□ 0.37
MT-CO1P00395 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
MT-CO1P00395 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MT-CO1P00395 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-CO1P00395 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-CO1P00395 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MT-CO1P00395 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.34■□□□□ 0.37
MT-CO1P00395 YBX2P1-201ENST00000394192 760 ntBASIC17.34■□□□□ 0.37
MT-CO1P00395 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-CO1P00395 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.34■□□□□ 0.37
MT-CO1P00395 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.34■□□□□ 0.37
MT-CO1P00395 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MT-CO1P00395 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.34■□□□□ 0.37
MT-CO1P00395 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-CO1P00395 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.34■□□□□ 0.37
MT-CO1P00395 RHOQP3-201ENST00000437982 621 ntBASIC17.34■□□□□ 0.37
MT-CO1P00395 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-CO1P00395 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MT-CO1P00395 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-CO1P00395 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
MT-CO1P00395 CXCL1P1-201ENST00000502804 216 ntBASIC17.34■□□□□ 0.37
MT-CO1P00395 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.34■□□□□ 0.37
MT-CO1P00395 ACTL9-202ENST00000612068 1252 ntBASIC17.34■□□□□ 0.37
MT-CO1P00395 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.34■□□□□ 0.37
MT-CO1P00395 AC004877.2-201ENST00000623941 599 ntBASIC17.34■□□□□ 0.37
MT-CO1P00395 AC011676.5-201ENST00000624864 2660 ntBASIC17.34■□□□□ 0.37
MT-CO1P00395 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.34■□□□□ 0.37
MT-CO1P00395 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-CO1P00395 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-CO1P00395 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
MT-CO1P00395 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-CO1P00395 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.34■□□□□ 0.37
MT-CO1P00395 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.34■□□□□ 0.37
MT-CO1P00395 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-CO1P00395 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-CO1P00395 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MT-CO1P00395 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
MT-CO1P00395 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MT-CO1P00395 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MT-CO1P00395 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
MT-CO1P00395 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MT-CO1P00395 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MT-CO1P00395 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MT-CO1P00395 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.33■□□□□ 0.37
MT-CO1P00395 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MT-CO1P00395 FRMD8P1-201ENST00000440433 1524 ntBASIC17.33■□□□□ 0.37
MT-CO1P00395 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-CO1P00395 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MT-CO1P00395 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MT-CO1P00395 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
MT-CO1P00395 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MT-CO1P00395 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-CO1P00395 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.33■□□□□ 0.36
MT-CO1P00395 KRT18P13-201ENST00000400056 1290 ntBASIC17.33■□□□□ 0.36
MT-CO1P00395 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.33■□□□□ 0.36
MT-CO1P00395 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.33■□□□□ 0.36
MT-CO1P00395 AC004832.2-201ENST00000426397 482 ntBASIC17.33■□□□□ 0.36
MT-CO1P00395 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MT-CO1P00395 AC107918.2-201ENST00000530817 355 ntBASIC17.33■□□□□ 0.36
MT-CO1P00395 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
MT-CO1P00395 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.33■□□□□ 0.36
MT-CO1P00395 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.33■□□□□ 0.36
MT-CO1P00395 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-CO1P00395 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MT-CO1P00395 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
MT-CO1P00395 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.33■□□□□ 0.36
MT-CO1P00395 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MT-CO1P00395 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-CO1P00395 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-CO1P00395 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-CO1P00395 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.33■□□□□ 0.36
MT-CO1P00395 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
MT-CO1P00395 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-CO1P00395 NKILA-202ENST00000614771 2598 ntBASIC17.33■□□□□ 0.36
MT-CO1P00395 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-CO1P00395 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
MT-CO1P00395 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MT-CO1P00395 BCAR1-209ENST00000546196 1340 ntBASIC17.32■□□□□ 0.36
MT-CO1P00395 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-CO1P00395 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-CO1P00395 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
MT-CO1P00395 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.32■□□□□ 0.36
MT-CO1P00395 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.32■□□□□ 0.36
MT-CO1P00395 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.32■□□□□ 0.36
MT-CO1P00395 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.32■□□□□ 0.36
MT-CO1P00395 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-CO1P00395 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.32■□□□□ 0.36
MT-CO1P00395 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.32■□□□□ 0.36
MT-CO1P00395 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
MT-CO1P00395 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.32■□□□□ 0.36
MT-CO1P00395 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.32■□□□□ 0.36
MT-CO1P00395 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms