Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.59■□□□□ 0.41
LRCH4O75427 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LRCH4O75427 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRCH4O75427 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.59■□□□□ 0.41
LRCH4O75427 AL160237.2-201ENST00000556165 472 ntBASIC17.59■□□□□ 0.41
LRCH4O75427 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.59■□□□□ 0.41
LRCH4O75427 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.59■□□□□ 0.41
LRCH4O75427 AL121894.2-201ENST00000602977 491 ntBASIC17.59■□□□□ 0.41
LRCH4O75427 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LRCH4O75427 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.59■□□□□ 0.41
LRCH4O75427 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRCH4O75427 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRCH4O75427 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LRCH4O75427 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRCH4O75427 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
LRCH4O75427 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
LRCH4O75427 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRCH4O75427 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LRCH4O75427 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRCH4O75427 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRCH4O75427 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRCH4O75427 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.58■□□□□ 0.41
LRCH4O75427 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRCH4O75427 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.58■□□□□ 0.41
LRCH4O75427 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LRCH4O75427 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRCH4O75427 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRCH4O75427 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRCH4O75427 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LRCH4O75427 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRCH4O75427 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.58■□□□□ 0.4
LRCH4O75427 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.58■□□□□ 0.4
LRCH4O75427 RPS2P28-201ENST00000314255 741 ntBASIC17.58■□□□□ 0.4
LRCH4O75427 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRCH4O75427 MRPL3P1-201ENST00000400109 1033 ntBASIC17.58■□□□□ 0.4
LRCH4O75427 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRCH4O75427 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
LRCH4O75427 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.58■□□□□ 0.4
LRCH4O75427 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.58■□□□□ 0.4
LRCH4O75427 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRCH4O75427 AC091167.2-201ENST00000579581 588 ntBASIC17.58■□□□□ 0.4
LRCH4O75427 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.58■□□□□ 0.4
LRCH4O75427 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRCH4O75427 AL773604.1-201ENST00000617417 272 ntBASIC17.58■□□□□ 0.4
LRCH4O75427 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.58■□□□□ 0.4
LRCH4O75427 AC117500.6-201ENST00000624871 588 ntBASIC17.58■□□□□ 0.4
LRCH4O75427 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.58■□□□□ 0.4
LRCH4O75427 PGM5P2-202ENST00000637225 1043 ntBASIC17.58■□□□□ 0.4
LRCH4O75427 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRCH4O75427 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRCH4O75427 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRCH4O75427 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.58■□□□□ 0.4
LRCH4O75427 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.58■□□□□ 0.4
LRCH4O75427 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRCH4O75427 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRCH4O75427 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRCH4O75427 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRCH4O75427 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LRCH4O75427 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRCH4O75427 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.57■□□□□ 0.4
LRCH4O75427 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
LRCH4O75427 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRCH4O75427 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRCH4O75427 AL671710.1-201ENST00000610245 2349 ntBASIC17.57■□□□□ 0.4
LRCH4O75427 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LRCH4O75427 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.57■□□□□ 0.4
LRCH4O75427 AL031284.1-201ENST00000419297 478 ntBASIC17.57■□□□□ 0.4
LRCH4O75427 PMS2P1-201ENST00000431037 1228 ntBASIC17.57■□□□□ 0.4
LRCH4O75427 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.57■□□□□ 0.4
LRCH4O75427 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.57■□□□□ 0.4
LRCH4O75427 AC108073.2-201ENST00000464002 357 ntBASIC17.57■□□□□ 0.4
LRCH4O75427 RNA5SP419-201ENST00000515908 135 ntBASIC17.57■□□□□ 0.4
LRCH4O75427 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.57■□□□□ 0.4
LRCH4O75427 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.57■□□□□ 0.4
LRCH4O75427 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.57■□□□□ 0.4
LRCH4O75427 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
LRCH4O75427 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.57■□□□□ 0.4
LRCH4O75427 OR7E47P-204ENST00000575924 449 ntBASIC17.57■□□□□ 0.4
LRCH4O75427 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.57■□□□□ 0.4
LRCH4O75427 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.57■□□□□ 0.4
LRCH4O75427 AC005593.1-201ENST00000624894 515 ntBASIC17.57■□□□□ 0.4
LRCH4O75427 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRCH4O75427 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRCH4O75427 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.57■□□□□ 0.4
LRCH4O75427 AC131009.4-201ENST00000624048 1740 ntBASIC17.57■□□□□ 0.4
LRCH4O75427 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRCH4O75427 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.57■□□□□ 0.4
LRCH4O75427 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRCH4O75427 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.56■□□□□ 0.4
LRCH4O75427 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH4O75427 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH4O75427 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH4O75427 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.56■□□□□ 0.4
LRCH4O75427 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LRCH4O75427 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH4O75427 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.56■□□□□ 0.4
LRCH4O75427 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.56■□□□□ 0.4
LRCH4O75427 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH4O75427 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
LRCH4O75427 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms