Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM3O75382 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM3O75382 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM3O75382 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRIM3O75382 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM3O75382 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM3O75382 AC046185.3-201ENST00000623228 1824 ntBASIC15.84■□□□□ 0.13
TRIM3O75382 AP002414.3-201ENST00000589352 1468 ntBASIC15.84■□□□□ 0.13
TRIM3O75382 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM3O75382 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
TRIM3O75382 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM3O75382 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM3O75382 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM3O75382 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRIM3O75382 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM3O75382 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRIM3O75382 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM3O75382 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM3O75382 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM3O75382 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM3O75382 AC073621.1-201ENST00000392730 636 ntBASIC15.84■□□□□ 0.13
TRIM3O75382 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM3O75382 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM3O75382 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRIM3O75382 AC092910.1-201ENST00000482027 1129 ntBASIC15.84■□□□□ 0.13
TRIM3O75382 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.84■□□□□ 0.13
TRIM3O75382 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM3O75382 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM3O75382 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM3O75382 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM3O75382 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM3O75382 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM3O75382 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM3O75382 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM3O75382 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM3O75382 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM3O75382 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM3O75382 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM3O75382 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM3O75382 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM3O75382 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM3O75382 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM3O75382 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM3O75382 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
TRIM3O75382 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM3O75382 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM3O75382 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM3O75382 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM3O75382 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM3O75382 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TRIM3O75382 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM3O75382 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM3O75382 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM3O75382 AC098831.1-202ENST00000438821 336 ntBASIC15.83■□□□□ 0.12
TRIM3O75382 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM3O75382 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM3O75382 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM3O75382 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM3O75382 SLC25A1P1-201ENST00000528351 927 ntBASIC15.83■□□□□ 0.12
TRIM3O75382 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM3O75382 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM3O75382 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 AL356488.2-201ENST00000602755 427 ntBASIC15.83■□□□□ 0.12
TRIM3O75382 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRIM3O75382 AL139424.1-201ENST00000607572 797 ntBASIC15.83■□□□□ 0.12
TRIM3O75382 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM3O75382 AC097637.2-201ENST00000624096 1997 ntBASIC15.83■□□□□ 0.12
TRIM3O75382 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRIM3O75382 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 PCDH8P1-201ENST00000428983 2773 ntBASIC15.83■□□□□ 0.12
TRIM3O75382 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
TRIM3O75382 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.83■□□□□ 0.12
TRIM3O75382 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
TRIM3O75382 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM3O75382 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms