Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
OPHN1O60890 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
OPHN1O60890 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.72■□□□□ 0.43
OPHN1O60890 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
OPHN1O60890 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.72■□□□□ 0.43
OPHN1O60890 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.72■□□□□ 0.43
OPHN1O60890 ABCD1P5-201ENST00000445663 754 ntBASIC17.72■□□□□ 0.43
OPHN1O60890 RNA5SP415-201ENST00000517246 115 ntBASIC17.72■□□□□ 0.43
OPHN1O60890 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.72■□□□□ 0.43
OPHN1O60890 AC027796.2-201ENST00000575326 344 ntBASIC17.72■□□□□ 0.43
OPHN1O60890 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.72■□□□□ 0.43
OPHN1O60890 AC073592.5-201ENST00000624854 528 ntBASIC17.72■□□□□ 0.43
OPHN1O60890 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
OPHN1O60890 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.72■□□□□ 0.43
OPHN1O60890 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
OPHN1O60890 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
OPHN1O60890 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
OPHN1O60890 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
OPHN1O60890 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
OPHN1O60890 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
OPHN1O60890 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
OPHN1O60890 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
OPHN1O60890 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
OPHN1O60890 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
OPHN1O60890 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
OPHN1O60890 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
OPHN1O60890 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
OPHN1O60890 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
OPHN1O60890 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
OPHN1O60890 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
OPHN1O60890 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.71■□□□□ 0.43
OPHN1O60890 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
OPHN1O60890 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
OPHN1O60890 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
OPHN1O60890 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.71■□□□□ 0.43
OPHN1O60890 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.71■□□□□ 0.43
OPHN1O60890 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.71■□□□□ 0.43
OPHN1O60890 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.71■□□□□ 0.43
OPHN1O60890 AC004967.1-201ENST00000453589 447 ntBASIC17.71■□□□□ 0.43
OPHN1O60890 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.71■□□□□ 0.43
OPHN1O60890 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.71■□□□□ 0.43
OPHN1O60890 RNA5SP416-201ENST00000516838 111 ntBASIC17.71■□□□□ 0.43
OPHN1O60890 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.71■□□□□ 0.43
OPHN1O60890 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.71■□□□□ 0.43
OPHN1O60890 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.71■□□□□ 0.43
OPHN1O60890 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.71■□□□□ 0.43
OPHN1O60890 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
OPHN1O60890 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.71■□□□□ 0.43
OPHN1O60890 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
OPHN1O60890 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
OPHN1O60890 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.71■□□□□ 0.43
OPHN1O60890 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
OPHN1O60890 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
OPHN1O60890 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
OPHN1O60890 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
OPHN1O60890 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
OPHN1O60890 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
OPHN1O60890 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
OPHN1O60890 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
OPHN1O60890 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
OPHN1O60890 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
OPHN1O60890 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.71■□□□□ 0.42
OPHN1O60890 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
OPHN1O60890 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
OPHN1O60890 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.71■□□□□ 0.42
OPHN1O60890 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
OPHN1O60890 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
OPHN1O60890 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
OPHN1O60890 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
OPHN1O60890 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
OPHN1O60890 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
OPHN1O60890 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
OPHN1O60890 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
OPHN1O60890 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
OPHN1O60890 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
OPHN1O60890 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
OPHN1O60890 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
OPHN1O60890 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.7■□□□□ 0.42
OPHN1O60890 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
OPHN1O60890 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
OPHN1O60890 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.7■□□□□ 0.42
OPHN1O60890 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.7■□□□□ 0.42
OPHN1O60890 AC112482.1-201ENST00000492080 688 ntBASIC17.7■□□□□ 0.42
OPHN1O60890 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.7■□□□□ 0.42
OPHN1O60890 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.7■□□□□ 0.42
OPHN1O60890 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
OPHN1O60890 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.7■□□□□ 0.42
OPHN1O60890 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.7■□□□□ 0.42
OPHN1O60890 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.7■□□□□ 0.42
OPHN1O60890 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
OPHN1O60890 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
OPHN1O60890 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
OPHN1O60890 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
OPHN1O60890 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.7■□□□□ 0.42
OPHN1O60890 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
OPHN1O60890 EGFEM1P-202ENST00000431685 1563 ntBASIC17.7■□□□□ 0.42
OPHN1O60890 PMPCAP1-201ENST00000508114 1576 ntBASIC17.7■□□□□ 0.42
OPHN1O60890 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.7■□□□□ 0.42
OPHN1O60890 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
OPHN1O60890 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms