Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.11■□□□□ 0.01
CYTIPO60759 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CYTIPO60759 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CYTIPO60759 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CYTIPO60759 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CYTIPO60759 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CYTIPO60759 MIR940-201ENST00000401276 94 ntBASIC15.11■□□□□ 0.01
CYTIPO60759 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.11■□□□□ 0.01
CYTIPO60759 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
CYTIPO60759 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.11■□□□□ 0.01
CYTIPO60759 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.11■□□□□ 0.01
CYTIPO60759 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.11■□□□□ 0.01
CYTIPO60759 AC010507.1-201ENST00000633895 436 ntBASIC15.11■□□□□ 0.01
CYTIPO60759 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CYTIPO60759 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.11■□□□□ 0.01
CYTIPO60759 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CYTIPO60759 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
CYTIPO60759 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CYTIPO60759 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CYTIPO60759 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CYTIPO60759 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CYTIPO60759 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CYTIPO60759 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CYTIPO60759 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CYTIPO60759 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.11■□□□□ 0.01
CYTIPO60759 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CYTIPO60759 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CYTIPO60759 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.1■□□□□ 0.01
CYTIPO60759 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.1■□□□□ 0.01
CYTIPO60759 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CYTIPO60759 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.1■□□□□ 0.01
CYTIPO60759 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.1■□□□□ 0.01
CYTIPO60759 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.1■□□□□ 0.01
CYTIPO60759 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.1■□□□□ 0.01
CYTIPO60759 RHOQP3-201ENST00000437982 621 ntBASIC15.1■□□□□ 0.01
CYTIPO60759 KRT18P2-201ENST00000447938 1258 ntBASIC15.1■□□□□ 0.01
CYTIPO60759 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.1■□□□□ 0.01
CYTIPO60759 POLD2P1-201ENST00000511220 997 ntBASIC15.1■□□□□ 0.01
CYTIPO60759 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.1■□□□□ 0.01
CYTIPO60759 AC005412.3-201ENST00000580309 715 ntBASIC15.1■□□□□ 0.01
CYTIPO60759 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.1■□□□□ 0.01
CYTIPO60759 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.1■□□□□ 0.01
CYTIPO60759 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.1■□□□□ 0.01
CYTIPO60759 ACTL9-202ENST00000612068 1252 ntBASIC15.1■□□□□ 0.01
CYTIPO60759 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.1■□□□□ 0.01
CYTIPO60759 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.1■□□□□ 0.01
CYTIPO60759 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.1■□□□□ 0.01
CYTIPO60759 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CYTIPO60759 AC060834.1-201ENST00000443027 2032 ntBASIC15.1■□□□□ 0.01
CYTIPO60759 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CYTIPO60759 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.1■□□□□ 0.01
CYTIPO60759 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CYTIPO60759 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CYTIPO60759 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.1■□□□□ 0.01
CYTIPO60759 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.1■□□□□ 0.01
CYTIPO60759 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.1■□□□□ 0.01
CYTIPO60759 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CYTIPO60759 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CYTIPO60759 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CYTIPO60759 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CYTIPO60759 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CYTIPO60759 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CYTIPO60759 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CYTIPO60759 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CYTIPO60759 AC092068.3-201ENST00000587894 2016 ntBASIC15.09■□□□□ 0.01
CYTIPO60759 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CYTIPO60759 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CYTIPO60759 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CYTIPO60759 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CYTIPO60759 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CYTIPO60759 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CYTIPO60759 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
CYTIPO60759 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CYTIPO60759 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CYTIPO60759 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.09■□□□□ 0.01
CYTIPO60759 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CYTIPO60759 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.09■□□□□ 0.01
CYTIPO60759 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.09■□□□□ 0.01
CYTIPO60759 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.09■□□□□ 0.01
CYTIPO60759 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CYTIPO60759 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CYTIPO60759 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms