Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.24■□□□□ 0.19
GFRA3O60609 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GFRA3O60609 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
GFRA3O60609 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GFRA3O60609 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.24■□□□□ 0.19
GFRA3O60609 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
GFRA3O60609 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.24■□□□□ 0.19
GFRA3O60609 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.24■□□□□ 0.19
GFRA3O60609 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.24■□□□□ 0.19
GFRA3O60609 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.24■□□□□ 0.19
GFRA3O60609 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.24■□□□□ 0.19
GFRA3O60609 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.24■□□□□ 0.19
GFRA3O60609 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.24■□□□□ 0.19
GFRA3O60609 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.24■□□□□ 0.19
GFRA3O60609 PAX6-247ENST00000638965 979 ntTSL 5 BASIC16.24■□□□□ 0.19
GFRA3O60609 AL033527.5-202ENST00000641632 1098 ntBASIC16.24■□□□□ 0.19
GFRA3O60609 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.24■□□□□ 0.19
GFRA3O60609 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GFRA3O60609 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.24■□□□□ 0.19
GFRA3O60609 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GFRA3O60609 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GFRA3O60609 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GFRA3O60609 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GFRA3O60609 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.24■□□□□ 0.19
GFRA3O60609 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GFRA3O60609 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GFRA3O60609 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GFRA3O60609 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GFRA3O60609 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.23■□□□□ 0.19
GFRA3O60609 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.23■□□□□ 0.19
GFRA3O60609 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GFRA3O60609 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.23■□□□□ 0.19
GFRA3O60609 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GFRA3O60609 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GFRA3O60609 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GFRA3O60609 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GFRA3O60609 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.23■□□□□ 0.19
GFRA3O60609 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.23■□□□□ 0.19
GFRA3O60609 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
GFRA3O60609 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GFRA3O60609 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.23■□□□□ 0.19
GFRA3O60609 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.23■□□□□ 0.19
GFRA3O60609 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.23■□□□□ 0.19
GFRA3O60609 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
GFRA3O60609 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.23■□□□□ 0.19
GFRA3O60609 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.23■□□□□ 0.19
GFRA3O60609 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
GFRA3O60609 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
GFRA3O60609 TDH-203ENST00000531764 1110 ntBASIC16.23■□□□□ 0.19
GFRA3O60609 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GFRA3O60609 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.23■□□□□ 0.19
GFRA3O60609 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.23■□□□□ 0.19
GFRA3O60609 MIR5189-201ENST00000577370 114 ntBASIC16.23■□□□□ 0.19
GFRA3O60609 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.23■□□□□ 0.19
GFRA3O60609 AC021097.1-201ENST00000607902 574 ntBASIC16.23■□□□□ 0.19
GFRA3O60609 AC020765.3-201ENST00000613051 740 ntBASIC16.23■□□□□ 0.19
GFRA3O60609 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.23■□□□□ 0.19
GFRA3O60609 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.23■□□□□ 0.19
GFRA3O60609 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GFRA3O60609 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
GFRA3O60609 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GFRA3O60609 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
GFRA3O60609 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.23■□□□□ 0.19
GFRA3O60609 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.23■□□□□ 0.19
GFRA3O60609 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GFRA3O60609 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GFRA3O60609 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GFRA3O60609 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
GFRA3O60609 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.22■□□□□ 0.19
GFRA3O60609 AC092978.1-202ENST00000637590 1327 ntBASIC16.22■□□□□ 0.19
GFRA3O60609 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GFRA3O60609 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
GFRA3O60609 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GFRA3O60609 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GFRA3O60609 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.22■□□□□ 0.19
GFRA3O60609 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.22■□□□□ 0.19
GFRA3O60609 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GFRA3O60609 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
GFRA3O60609 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GFRA3O60609 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.22■□□□□ 0.19
GFRA3O60609 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.22■□□□□ 0.19
GFRA3O60609 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.22■□□□□ 0.19
GFRA3O60609 RPL17P11-201ENST00000417593 544 ntBASIC16.22■□□□□ 0.19
GFRA3O60609 AL355334.1-201ENST00000417713 215 ntBASIC16.22■□□□□ 0.19
GFRA3O60609 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GFRA3O60609 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.22■□□□□ 0.19
GFRA3O60609 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.22■□□□□ 0.19
GFRA3O60609 AKR7A2P1-201ENST00000460134 915 ntBASIC16.22■□□□□ 0.19
GFRA3O60609 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.22■□□□□ 0.19
GFRA3O60609 AP000812.2-201ENST00000538934 718 ntBASIC16.22■□□□□ 0.19
GFRA3O60609 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.22■□□□□ 0.19
GFRA3O60609 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.22■□□□□ 0.19
GFRA3O60609 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.22■□□□□ 0.19
GFRA3O60609 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.22■□□□□ 0.19
GFRA3O60609 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.22■□□□□ 0.19
GFRA3O60609 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
GFRA3O60609 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.22■□□□□ 0.19
GFRA3O60609 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.22■□□□□ 0.19
GFRA3O60609 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
GFRA3O60609 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms