Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHL1O00533 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHL1O00533 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHL1O00533 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.6■■□□□ 1.05
CHL1O00533 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHL1O00533 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.6■■□□□ 1.05
CHL1O00533 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHL1O00533 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
CHL1O00533 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHL1O00533 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHL1O00533 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHL1O00533 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHL1O00533 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHL1O00533 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHL1O00533 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.6■■□□□ 1.05
CHL1O00533 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.6■■□□□ 1.05
CHL1O00533 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.6■■□□□ 1.05
CHL1O00533 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CHL1O00533 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHL1O00533 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.6■■□□□ 1.05
CHL1O00533 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.6■■□□□ 1.05
CHL1O00533 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.6■■□□□ 1.05
CHL1O00533 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHL1O00533 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHL1O00533 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.6■■□□□ 1.05
CHL1O00533 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHL1O00533 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.6■■□□□ 1.05
CHL1O00533 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHL1O00533 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CHL1O00533 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.6■■□□□ 1.05
CHL1O00533 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHL1O00533 KRT18P28-201ENST00000453838 1332 ntBASIC21.59■■□□□ 1.05
CHL1O00533 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CHL1O00533 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC21.59■■□□□ 1.05
CHL1O00533 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
CHL1O00533 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CHL1O00533 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.59■■□□□ 1.05
CHL1O00533 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 AL627223.1-201ENST00000416693 442 ntBASIC21.59■■□□□ 1.05
CHL1O00533 AL592309.1-201ENST00000443127 649 ntBASIC21.59■■□□□ 1.05
CHL1O00533 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.59■■□□□ 1.05
CHL1O00533 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC21.59■■□□□ 1.05
CHL1O00533 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC21.59■■□□□ 1.05
CHL1O00533 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.59■■□□□ 1.05
CHL1O00533 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.59■■□□□ 1.05
CHL1O00533 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.59■■□□□ 1.05
CHL1O00533 AL138918.1-201ENST00000568306 659 ntBASIC21.59■■□□□ 1.05
CHL1O00533 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.59■■□□□ 1.05
CHL1O00533 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.59■■□□□ 1.05
CHL1O00533 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.59■■□□□ 1.05
CHL1O00533 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CHL1O00533 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHL1O00533 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHL1O00533 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC21.58■■□□□ 1.05
CHL1O00533 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHL1O00533 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.58■■□□□ 1.05
CHL1O00533 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHL1O00533 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CHL1O00533 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHL1O00533 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHL1O00533 MIR346-201ENST00000362234 95 ntBASIC21.58■■□□□ 1.05
CHL1O00533 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.58■■□□□ 1.05
CHL1O00533 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.58■■□□□ 1.05
CHL1O00533 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.58■■□□□ 1.05
CHL1O00533 FAM58DP-201ENST00000428076 619 ntBASIC21.58■■□□□ 1.05
CHL1O00533 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.58■■□□□ 1.05
CHL1O00533 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHL1O00533 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.58■■□□□ 1.05
CHL1O00533 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.58■■□□□ 1.05
CHL1O00533 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.58■■□□□ 1.05
CHL1O00533 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.58■■□□□ 1.05
CHL1O00533 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CHL1O00533 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC21.58■■□□□ 1.05
CHL1O00533 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHL1O00533 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHL1O00533 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHL1O00533 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC21.58■■□□□ 1.04
CHL1O00533 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.04
CHL1O00533 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHL1O00533 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.57■■□□□ 1.04
CHL1O00533 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHL1O00533 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC21.57■■□□□ 1.04
CHL1O00533 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms