Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.93■□□□□ 0.3
CFAP99D6REC4 PI4KAP1-204ENST00000612579 1703 ntBASIC16.93■□□□□ 0.3
CFAP99D6REC4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.93■□□□□ 0.3
CFAP99D6REC4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 AC243591.1-201ENST00000452967 1364 ntBASIC16.93■□□□□ 0.3
CFAP99D6REC4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CFAP99D6REC4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 AC073621.1-201ENST00000392730 636 ntBASIC16.93■□□□□ 0.3
CFAP99D6REC4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CFAP99D6REC4 RPS15P9-201ENST00000494093 319 ntBASIC16.93■□□□□ 0.3
CFAP99D6REC4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.93■□□□□ 0.3
CFAP99D6REC4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.93■□□□□ 0.3
CFAP99D6REC4 AC132872.1-201ENST00000566986 1195 ntBASIC16.93■□□□□ 0.3
CFAP99D6REC4 GGTLC5P-201ENST00000617623 998 ntBASIC16.93■□□□□ 0.3
CFAP99D6REC4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.93■□□□□ 0.3
CFAP99D6REC4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.93■□□□□ 0.3
CFAP99D6REC4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CFAP99D6REC4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.93■□□□□ 0.3
CFAP99D6REC4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.93■□□□□ 0.3
CFAP99D6REC4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP99D6REC4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.93■□□□□ 0.3
CFAP99D6REC4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP99D6REC4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 AP001094.4-201ENST00000579008 2176 ntBASIC16.92■□□□□ 0.3
CFAP99D6REC4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP99D6REC4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP99D6REC4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP99D6REC4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP99D6REC4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP99D6REC4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP99D6REC4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP99D6REC4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP99D6REC4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP99D6REC4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 AC026396.1-201ENST00000419388 421 ntBASIC16.92■□□□□ 0.3
CFAP99D6REC4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP99D6REC4 AC092910.1-201ENST00000482027 1129 ntBASIC16.92■□□□□ 0.3
CFAP99D6REC4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 MIR7706-201ENST00000613747 67 ntBASIC16.92■□□□□ 0.3
CFAP99D6REC4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP99D6REC4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP99D6REC4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP99D6REC4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 AP002414.3-201ENST00000589352 1468 ntBASIC16.92■□□□□ 0.3
CFAP99D6REC4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP99D6REC4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CFAP99D6REC4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP99D6REC4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CFAP99D6REC4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CFAP99D6REC4 AL513477.1-201ENST00000602865 2407 ntBASIC16.91■□□□□ 0.3
CFAP99D6REC4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CFAP99D6REC4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CFAP99D6REC4 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.91■□□□□ 0.3
CFAP99D6REC4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CFAP99D6REC4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.91■□□□□ 0.3
CFAP99D6REC4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CFAP99D6REC4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CFAP99D6REC4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CFAP99D6REC4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CFAP99D6REC4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CFAP99D6REC4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CFAP99D6REC4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.91■□□□□ 0.3
CFAP99D6REC4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms