Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 AC012640.2-201ENST00000561606 901 ntBASIC14.95□□□□□ -0.02
NPIPB4C9JG80 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.95□□□□□ -0.02
NPIPB4C9JG80 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 AL512652.2-201ENST00000625156 1716 ntBASIC14.95□□□□□ -0.02
NPIPB4C9JG80 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 MTHFR-217ENST00000641820 1569 ntBASIC14.94□□□□□ -0.02
NPIPB4C9JG80 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 AC079781.3-201ENST00000449110 356 ntBASIC14.94□□□□□ -0.02
NPIPB4C9JG80 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 AC108073.2-201ENST00000464002 357 ntBASIC14.94□□□□□ -0.02
NPIPB4C9JG80 AP002469.2-201ENST00000531724 424 ntBASIC14.94□□□□□ -0.02
NPIPB4C9JG80 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 AC104692.2-201ENST00000603054 253 ntBASIC14.94□□□□□ -0.02
NPIPB4C9JG80 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 AP002414.3-201ENST00000589352 1468 ntBASIC14.94□□□□□ -0.02
NPIPB4C9JG80 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NPIPB4C9JG80 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 PCDHB19P-201ENST00000570871 2371 ntBASIC14.93□□□□□ -0.02
NPIPB4C9JG80 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 GGT4P-201ENST00000623672 1708 ntBASIC14.93□□□□□ -0.02
NPIPB4C9JG80 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 AL160237.2-201ENST00000556165 472 ntBASIC14.93□□□□□ -0.02
NPIPB4C9JG80 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 OR7E47P-204ENST00000575924 449 ntBASIC14.93□□□□□ -0.02
NPIPB4C9JG80 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 AL031008.1-201ENST00000619963 541 ntBASIC14.93□□□□□ -0.02
NPIPB4C9JG80 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPB4C9JG80 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms