Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 AC073592.5-201ENST00000624854 528 ntBASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB6Q9Y5F9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
PCDHGB6Q9Y5F9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
PCDHGB6Q9Y5F9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB6Q9Y5F9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.08■□□□□ 0.17
PCDHGB6Q9Y5F9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB6Q9Y5F9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 POLD2P1-201ENST00000511220 997 ntBASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 MIR1199-201ENST00000621445 119 ntBASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 AL049757.1-201ENST00000616842 1596 ntBASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGB6Q9Y5F9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 BX005266.1-201ENST00000473402 457 ntBASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 AC002558.1-201ENST00000488906 803 ntBASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 PGAM5P1-201ENST00000518923 814 ntBASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 AL356488.2-201ENST00000602755 427 ntBASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 AC106886.4-201ENST00000623557 2502 ntBASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms