Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 GPR89P-201ENST00000407924 1495 ntBASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 SLC25A1P3-201ENST00000395415 828 ntBASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 AC254562.1-201ENST00000417586 456 ntBASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 EGFEM1P-202ENST00000431685 1563 ntBASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 AC006504.4-201ENST00000592118 1568 ntBASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB11Q9Y5F2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 PRSS29P-201ENST00000440800 595 ntBASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 RPS15P9-201ENST00000494093 319 ntBASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 MIR4469-201ENST00000583919 79 ntBASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 AC008667.4-201ENST00000607370 168 ntBASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB11Q9Y5F2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 VN2R19P-201ENST00000442399 1052 ntBASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 KRT18P2-201ENST00000447938 1258 ntBASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 IGHV3-65-201ENST00000523210 341 ntBASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 C20orf181-201ENST00000623918 480 ntBASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms