Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 AC009154.2-201ENST00000621177 724 ntBASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 KRT18P65-201ENST00000439811 1286 ntBASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 AC104640.1-201ENST00000562617 2109 ntBASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 AC011840.4-201ENST00000578471 627 ntBASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HCC1Q9Y3T6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 AC092329.2-201ENST00000598402 547 ntBASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
R3HCC1Q9Y3T6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms