Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTCBQ9Y3I0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
RTCBQ9Y3I0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
RTCBQ9Y3I0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTCBQ9Y3I0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTCBQ9Y3I0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTCBQ9Y3I0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 SLC25A1P3-201ENST00000395415 828 ntBASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 AP006294.1-201ENST00000415407 339 ntBASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 AC017083.2-201ENST00000608069 979 ntBASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 AC087289.5-201ENST00000586076 3175 ntBASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
RTCBQ9Y3I0 BTBD7P1-201ENST00000447253 1453 ntBASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 AL391825.1-201ENST00000457671 1364 ntBASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 AC087499.6-201ENST00000411576 835 ntBASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 RN7SL752P-201ENST00000463779 287 ntBASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 BANF1P1-201ENST00000553684 263 ntBASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 AC104794.3-201ENST00000566840 1248 ntBASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 FRMD8P1-201ENST00000440433 1524 ntBASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 AC073439.1-201ENST00000624121 1774 ntBASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTCBQ9Y3I0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 AL512384.1-201ENST00000406683 331 ntBASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 MAX-210ENST00000555419 765 ntTSL 5 BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 AL079307.3-201ENST00000556114 283 ntBASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 AL133215.2-201ENST00000609242 977 ntBASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 AL162274.1-201ENST00000617191 1098 ntBASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms