Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 AL391256.1-201ENST00000443260 1855 ntBASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 AC068587.6-202ENST00000641839 5619 ntBASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 REXO1L10P-201ENST00000615707 1290 ntBASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 REXO1L12P-201ENST00000622156 912 ntBASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 FSCN1P1-201ENST00000568912 1481 ntBASIC16.16■□□□□ 0.18
LRCH1Q9Y2L9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 PPT1-215ENST00000641471 2368 ntBASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 HOXB1-202ENST00000577092 1414 ntBASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 AC023908.3-201ENST00000564211 3047 ntBASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 AL596087.1-201ENST00000400979 1969 ntBASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH1Q9Y2L9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
LRCH1Q9Y2L9 AC026748.1-201ENST00000624349 3251 ntBASIC16.14■□□□□ 0.18
LRCH1Q9Y2L9 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 RBM17P1-201ENST00000453646 1190 ntBASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 AC091390.4-202ENST00000476426 537 ntBASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.14■□□□□ 0.17
LRCH1Q9Y2L9 DGCR10-201ENST00000609839 495 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms