Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 AC092580.3-201ENST00000430932 139 ntBASIC16.07■□□□□ 0.16
LHX6Q9UPM6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 RAB43P1-201ENST00000561790 589 ntBASIC16.07■□□□□ 0.16
LHX6Q9UPM6 AC099522.2-201ENST00000607001 744 ntBASIC16.07■□□□□ 0.16
LHX6Q9UPM6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 AL157762.1-201ENST00000619612 415 ntBASIC16.07■□□□□ 0.16
LHX6Q9UPM6 AC009118.3-201ENST00000622896 873 ntBASIC16.07■□□□□ 0.16
LHX6Q9UPM6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 AC093010.1-201ENST00000473625 1624 ntBASIC16.07■□□□□ 0.16
LHX6Q9UPM6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 AC008894.3-201ENST00000624324 3103 ntBASIC16.06■□□□□ 0.16
LHX6Q9UPM6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 FAM86MP-201ENST00000340703 885 ntBASIC16.06■□□□□ 0.16
LHX6Q9UPM6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 COX5BP2-201ENST00000392354 334 ntBASIC16.06■□□□□ 0.16
LHX6Q9UPM6 AC092506.1-202ENST00000401022 528 ntBASIC16.06■□□□□ 0.16
LHX6Q9UPM6 AC079776.1-201ENST00000401540 1152 ntBASIC16.06■□□□□ 0.16
LHX6Q9UPM6 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 AC092552.1-201ENST00000547243 906 ntBASIC16.06■□□□□ 0.16
LHX6Q9UPM6 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.06■□□□□ 0.16
LHX6Q9UPM6 AC073575.2-201ENST00000614212 627 ntBASIC16.06■□□□□ 0.16
LHX6Q9UPM6 IGHV3-72-202ENST00000621503 303 ntBASIC16.06■□□□□ 0.16
LHX6Q9UPM6 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 AC126763.1-201ENST00000552015 2118 ntBASIC16.06■□□□□ 0.16
LHX6Q9UPM6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.06■□□□□ 0.16
LHX6Q9UPM6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LHX6Q9UPM6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LHX6Q9UPM6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.05■□□□□ 0.16
LHX6Q9UPM6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LHX6Q9UPM6 TNRC18P3-201ENST00000441896 2691 ntBASIC16.05■□□□□ 0.16
LHX6Q9UPM6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LHX6Q9UPM6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LHX6Q9UPM6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LHX6Q9UPM6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.05■□□□□ 0.16
LHX6Q9UPM6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LHX6Q9UPM6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LHX6Q9UPM6 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LHX6Q9UPM6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LHX6Q9UPM6 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.05■□□□□ 0.16
LHX6Q9UPM6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LHX6Q9UPM6 KLF4P1-201ENST00000412782 1185 ntBASIC16.05■□□□□ 0.16
LHX6Q9UPM6 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms