Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR3Q9UNL2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.17■□□□□ 0.02
SSR3Q9UNL2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
SSR3Q9UNL2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.17■□□□□ 0.02
SSR3Q9UNL2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR3Q9UNL2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.17■□□□□ 0.02
SSR3Q9UNL2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 AC004263.2-201ENST00000617183 678 ntBASIC15.16■□□□□ 0.02
SSR3Q9UNL2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SSR3Q9UNL2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 GPR89P-201ENST00000407924 1495 ntBASIC15.15■□□□□ 0.02
SSR3Q9UNL2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 AC109462.3-201ENST00000573934 613 ntBASIC15.15■□□□□ 0.02
SSR3Q9UNL2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSR3Q9UNL2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SSR3Q9UNL2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SSR3Q9UNL2 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SSR3Q9UNL2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSR3Q9UNL2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SSR3Q9UNL2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSR3Q9UNL2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms