Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 AL450487.1-201ENST00000426799 995 ntBASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 TK1-204ENST00000590430 683 ntTSL 3 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 MTDHP3-201ENST00000594186 672 ntBASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 AC008608.2-201ENST00000606089 416 ntBASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 LYSMD4-203ENST00000378904 2122 ntBASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 PAN3-AS1-201ENST00000563843 1351 ntBASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 AL118508.1-201ENST00000613502 2345 ntBASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00474Q9P2X8 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 ACTG1P4-201ENST00000425123 1122 ntBASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 AC073648.2-201ENST00000510116 352 ntBASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms