Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 SLC25A1P1-201ENST00000528351 927 ntBASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 AC104109.2-201ENST00000602919 1418 ntBASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 AC124067.4-201ENST00000519691 2379 ntBASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 HLA-J-202ENST00000469281 1241 ntBASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 RPL13AP23-201ENST00000480739 586 ntBASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 CXCL1P1-201ENST00000502804 216 ntBASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 CYP2A7P1-201ENST00000595391 815 ntBASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.78■□□□□ 0.6
BLOC1S4Q9NUP1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 AL512652.2-201ENST00000625156 1716 ntBASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 AL590627.1-203ENST00000421194 1026 ntBASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 BX640515.1-201ENST00000617215 977 ntBASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
BLOC1S4Q9NUP1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.59
BLOC1S4Q9NUP1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
BLOC1S4Q9NUP1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
BLOC1S4Q9NUP1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.59
BLOC1S4Q9NUP1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
BLOC1S4Q9NUP1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
BLOC1S4Q9NUP1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.77■□□□□ 0.59
BLOC1S4Q9NUP1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
BLOC1S4Q9NUP1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.77■□□□□ 0.59
BLOC1S4Q9NUP1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms