Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 PAUPAR-201ENST00000630360 2965 ntBASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 AC006449.5-201ENST00000610658 2098 ntBASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 AC087499.1-201ENST00000418141 1075 ntBASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 ATP5G1P1-201ENST00000448724 379 ntBASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 KRT18P38-201ENST00000449496 1282 ntBASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 STK24-203ENST00000397517 4578 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 AC096633.1-201ENST00000422446 749 ntBASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 LIN28AP1-201ENST00000429574 405 ntBASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 VENTXP5-201ENST00000523979 775 ntBASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 AC005332.3-201ENST00000589904 676 ntBASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 GPR32P1-201ENST00000601788 811 ntBASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 PCDHB17P-201ENST00000539533 2393 ntBASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD4L1Q9NU39 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 RLN2-201ENST00000381627 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 AC110800.1-201ENST00000505498 441 ntTSL 2 BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 AC104072.1-201ENST00000568817 668 ntBASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 RNF126P1-202ENST00000569893 925 ntBASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.52■□□□□ 0.88
FOXD4L1Q9NU39 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
FOXD4L1Q9NU39 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
FOXD4L1Q9NU39 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
FOXD4L1Q9NU39 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC20.52■□□□□ 0.87
FOXD4L1Q9NU39 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms