Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR9Q9NR96 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR9Q9NR96 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.88■□□□□ 0.45
TLR9Q9NR96 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.88■□□□□ 0.45
TLR9Q9NR96 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.88■□□□□ 0.45
TLR9Q9NR96 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.88■□□□□ 0.45
TLR9Q9NR96 AC073592.8-201ENST00000624126 511 ntBASIC17.88■□□□□ 0.45
TLR9Q9NR96 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.88■□□□□ 0.45
TLR9Q9NR96 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR9Q9NR96 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR9Q9NR96 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR9Q9NR96 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.88■□□□□ 0.45
TLR9Q9NR96 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.88■□□□□ 0.45
TLR9Q9NR96 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR9Q9NR96 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR9Q9NR96 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.88■□□□□ 0.45
TLR9Q9NR96 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TLR9Q9NR96 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TLR9Q9NR96 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR9Q9NR96 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 AC027369.6-201ENST00000525520 931 ntBASIC17.87■□□□□ 0.45
TLR9Q9NR96 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 AL359881.2-201ENST00000602973 570 ntBASIC17.87■□□□□ 0.45
TLR9Q9NR96 AC009118.2-201ENST00000613275 655 ntBASIC17.87■□□□□ 0.45
TLR9Q9NR96 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TLR9Q9NR96 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR9Q9NR96 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TLR9Q9NR96 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR9Q9NR96 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR9Q9NR96 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR9Q9NR96 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TLR9Q9NR96 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR9Q9NR96 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.87■□□□□ 0.45
TLR9Q9NR96 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TLR9Q9NR96 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR9Q9NR96 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.86■□□□□ 0.45
TLR9Q9NR96 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.86■□□□□ 0.45
TLR9Q9NR96 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
TLR9Q9NR96 OR8S1-201ENST00000310194 1080 ntBASIC17.86■□□□□ 0.45
TLR9Q9NR96 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR9Q9NR96 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
TLR9Q9NR96 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
TLR9Q9NR96 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR9Q9NR96 PIN1P1-201ENST00000412108 996 ntBASIC17.86■□□□□ 0.45
TLR9Q9NR96 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.86■□□□□ 0.45
TLR9Q9NR96 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.86■□□□□ 0.45
TLR9Q9NR96 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.86■□□□□ 0.45
TLR9Q9NR96 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.86■□□□□ 0.45
TLR9Q9NR96 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TLR9Q9NR96 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.86■□□□□ 0.45
TLR9Q9NR96 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TLR9Q9NR96 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.86■□□□□ 0.45
TLR9Q9NR96 AC100757.3-201ENST00000622361 1406 ntBASIC17.86■□□□□ 0.45
TLR9Q9NR96 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR9Q9NR96 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
TLR9Q9NR96 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR9Q9NR96 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR9Q9NR96 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.86■□□□□ 0.45
TLR9Q9NR96 AC012317.2-201ENST00000623305 2251 ntBASIC17.86■□□□□ 0.45
TLR9Q9NR96 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.85■□□□□ 0.45
TLR9Q9NR96 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.85■□□□□ 0.45
TLR9Q9NR96 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR9Q9NR96 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR9Q9NR96 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TLR9Q9NR96 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR9Q9NR96 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TLR9Q9NR96 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR9Q9NR96 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TLR9Q9NR96 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR9Q9NR96 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR9Q9NR96 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR9Q9NR96 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR9Q9NR96 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR9Q9NR96 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR9Q9NR96 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR9Q9NR96 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR9Q9NR96 MRPS18AP1-201ENST00000414458 589 ntBASIC17.85■□□□□ 0.45
TLR9Q9NR96 AC245100.3-201ENST00000441281 285 ntBASIC17.85■□□□□ 0.45
TLR9Q9NR96 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR9Q9NR96 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.85■□□□□ 0.45
TLR9Q9NR96 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms