Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NXF3Q9H4D5 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.22■□□□□ 0.51
NXF3Q9H4D5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NXF3Q9H4D5 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NXF3Q9H4D5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 AC005237.2-201ENST00000434368 219 ntBASIC18.21■□□□□ 0.51
NXF3Q9H4D5 SPCS2P4-201ENST00000436160 681 ntBASIC18.21■□□□□ 0.51
NXF3Q9H4D5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 AC009093.7-201ENST00000623853 1223 ntBASIC18.21■□□□□ 0.51
NXF3Q9H4D5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.21■□□□□ 0.51
NXF3Q9H4D5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.2■□□□□ 0.5
NXF3Q9H4D5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 HLA-J-203ENST00000494367 1087 ntBASIC18.2■□□□□ 0.5
NXF3Q9H4D5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 AC004449.1-201ENST00000564240 433 ntBASIC18.2■□□□□ 0.5
NXF3Q9H4D5 MIR3909-201ENST00000579518 119 ntBASIC18.2■□□□□ 0.5
NXF3Q9H4D5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 WASH6P-202ENST00000359512 1437 ntBASIC18.2■□□□□ 0.5
NXF3Q9H4D5 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 TUBB8P12-201ENST00000308911 1335 ntBASIC18.2■□□□□ 0.5
NXF3Q9H4D5 TUBB7P-202ENST00000428444 1305 ntBASIC18.2■□□□□ 0.5
NXF3Q9H4D5 TUBB8P7-204ENST00000567960 1332 ntBASIC18.2■□□□□ 0.5
NXF3Q9H4D5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NXF3Q9H4D5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 AC016027.1-202ENST00000607927 1699 ntBASIC18.19■□□□□ 0.5
NXF3Q9H4D5 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 PMS2P4-201ENST00000412466 1052 ntBASIC18.19■□□□□ 0.5
NXF3Q9H4D5 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 FAM58DP-201ENST00000428076 619 ntBASIC18.19■□□□□ 0.5
NXF3Q9H4D5 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NXF3Q9H4D5 LINC00628-201ENST00000628516 1289 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms