Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 AC096582.2-201ENST00000510860 516 ntBASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 TP73-AS1-207ENST00000624167 988 ntBASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.52■□□□□ 0.4
FOXP3Q9BZS1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.52■□□□□ 0.39
FOXP3Q9BZS1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXP3Q9BZS1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXP3Q9BZS1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.52■□□□□ 0.39
FOXP3Q9BZS1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.52■□□□□ 0.39
FOXP3Q9BZS1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.52■□□□□ 0.39
FOXP3Q9BZS1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXP3Q9BZS1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXP3Q9BZS1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXP3Q9BZS1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
FOXP3Q9BZS1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
FOXP3Q9BZS1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 PCDHB17P-201ENST00000539533 2393 ntBASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 BNIP3P18-201ENST00000593976 575 ntBASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 AC023511.2-201ENST00000618803 211 ntBASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXP3Q9BZS1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 AL590627.1-203ENST00000421194 1026 ntBASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 AL591684.3-201ENST00000605187 298 ntBASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms