Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC94Q9BW85 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC94Q9BW85 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC94Q9BW85 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC94Q9BW85 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 AP005117.1-201ENST00000584346 1413 ntBASIC19.26■□□□□ 0.67
CCDC94Q9BW85 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 AC103564.2-201ENST00000432853 1299 ntBASIC19.26■□□□□ 0.67
CCDC94Q9BW85 DDX43P3-201ENST00000441064 443 ntBASIC19.26■□□□□ 0.67
CCDC94Q9BW85 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 FDX1P1-201ENST00000449115 551 ntBASIC19.26■□□□□ 0.67
CCDC94Q9BW85 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC94Q9BW85 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 KRT18P55-202ENST00000578578 1546 ntBASIC19.25■□□□□ 0.67
CCDC94Q9BW85 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.25■□□□□ 0.67
CCDC94Q9BW85 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 AC009078.2-202ENST00000463353 338 ntBASIC19.25■□□□□ 0.67
CCDC94Q9BW85 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 AC104640.1-201ENST00000562617 2109 ntBASIC19.25■□□□□ 0.67
CCDC94Q9BW85 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 AC009949.1-201ENST00000623048 1830 ntBASIC19.25■□□□□ 0.67
CCDC94Q9BW85 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC94Q9BW85 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 FGFR3P6-201ENST00000457012 610 ntBASIC19.24■□□□□ 0.67
CCDC94Q9BW85 SCARNA2-201ENST00000458748 420 ntBASIC19.24■□□□□ 0.67
CCDC94Q9BW85 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 AL662844.1-201ENST00000546340 181 ntBASIC19.24■□□□□ 0.67
CCDC94Q9BW85 AC064862.7-201ENST00000604520 867 ntBASIC19.24■□□□□ 0.67
CCDC94Q9BW85 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 TP73-AS1-207ENST00000624167 988 ntBASIC19.24■□□□□ 0.67
CCDC94Q9BW85 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 FER1L4-210ENST00000615531 5998 ntBASIC19.24■□□□□ 0.67
CCDC94Q9BW85 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 AC006449.5-201ENST00000610658 2098 ntBASIC19.24■□□□□ 0.67
CCDC94Q9BW85 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 BX276092.7-203ENST00000637198 1536 ntBASIC19.24■□□□□ 0.67
CCDC94Q9BW85 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CCDC94Q9BW85 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms