Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 AL359183.1-201ENST00000623796 2132 ntBASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 NORAD-201ENST00000565493 5339 ntBASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFAF3Q9BU61 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 CR769767.2-201ENST00000622735 460 ntBASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFAF3Q9BU61 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 AL096828.2-201ENST00000567259 1965 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms