Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 LIN28AP1-201ENST00000429574 405 ntBASIC16.54■□□□□ 0.24
EBF4Q9BQW3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 AL353801.3-201ENST00000609898 542 ntBASIC16.54■□□□□ 0.24
EBF4Q9BQW3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 AL596087.1-201ENST00000400979 1969 ntBASIC16.54■□□□□ 0.24
EBF4Q9BQW3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
EBF4Q9BQW3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 SPDYE13P-201ENST00000445314 798 ntBASIC16.53■□□□□ 0.24
EBF4Q9BQW3 AC112907.2-201ENST00000448639 330 ntBASIC16.53■□□□□ 0.24
EBF4Q9BQW3 ATP5G1P1-201ENST00000448724 379 ntBASIC16.53■□□□□ 0.24
EBF4Q9BQW3 HLA-J-202ENST00000469281 1241 ntBASIC16.53■□□□□ 0.24
EBF4Q9BQW3 RN7SL606P-201ENST00000472779 293 ntBASIC16.53■□□□□ 0.24
EBF4Q9BQW3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.53■□□□□ 0.24
EBF4Q9BQW3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
EBF4Q9BQW3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
EBF4Q9BQW3 AL603832.2-201ENST00000566195 2125 ntBASIC16.52■□□□□ 0.24
EBF4Q9BQW3 LINC00895-201ENST00000629028 1637 ntBASIC16.52■□□□□ 0.24
EBF4Q9BQW3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.52■□□□□ 0.24
EBF4Q9BQW3 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.52■□□□□ 0.24
EBF4Q9BQW3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.52■□□□□ 0.24
EBF4Q9BQW3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.52■□□□□ 0.24
EBF4Q9BQW3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
EBF4Q9BQW3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
EBF4Q9BQW3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
EBF4Q9BQW3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms