Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMOQ99835 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SMOQ99835 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMOQ99835 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.69■□□□□ 0.42
SMOQ99835 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMOQ99835 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMOQ99835 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SMOQ99835 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMOQ99835 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMOQ99835 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMOQ99835 AC002056.1-201ENST00000395613 760 ntBASIC17.69■□□□□ 0.42
SMOQ99835 AC211486.1-202ENST00000416371 468 ntBASIC17.69■□□□□ 0.42
SMOQ99835 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
SMOQ99835 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.69■□□□□ 0.42
SMOQ99835 AC211476.1-201ENST00000503899 468 ntBASIC17.69■□□□□ 0.42
SMOQ99835 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.69■□□□□ 0.42
SMOQ99835 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
SMOQ99835 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMOQ99835 AL031055.1-201ENST00000606362 631 ntBASIC17.69■□□□□ 0.42
SMOQ99835 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMOQ99835 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
SMOQ99835 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMOQ99835 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMOQ99835 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
SMOQ99835 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SMOQ99835 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMOQ99835 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMOQ99835 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SMOQ99835 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMOQ99835 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.68■□□□□ 0.42
SMOQ99835 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SMOQ99835 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMOQ99835 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMOQ99835 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
SMOQ99835 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SMOQ99835 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.68■□□□□ 0.42
SMOQ99835 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.68■□□□□ 0.42
SMOQ99835 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.68■□□□□ 0.42
SMOQ99835 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
SMOQ99835 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMOQ99835 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
SMOQ99835 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SMOQ99835 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMOQ99835 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMOQ99835 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMOQ99835 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.68■□□□□ 0.42
SMOQ99835 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMOQ99835 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.68■□□□□ 0.42
SMOQ99835 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.68■□□□□ 0.42
SMOQ99835 ADH5P3-201ENST00000433842 1137 ntBASIC17.68■□□□□ 0.42
SMOQ99835 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.68■□□□□ 0.42
SMOQ99835 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.68■□□□□ 0.42
SMOQ99835 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.68■□□□□ 0.42
SMOQ99835 AC004967.1-201ENST00000453589 447 ntBASIC17.68■□□□□ 0.42
SMOQ99835 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.68■□□□□ 0.42
SMOQ99835 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.68■□□□□ 0.42
SMOQ99835 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.68■□□□□ 0.42
SMOQ99835 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.68■□□□□ 0.42
SMOQ99835 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
SMOQ99835 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.68■□□□□ 0.42
SMOQ99835 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.68■□□□□ 0.42
SMOQ99835 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SMOQ99835 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.68■□□□□ 0.42
SMOQ99835 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMOQ99835 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMOQ99835 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
SMOQ99835 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMOQ99835 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SMOQ99835 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.68■□□□□ 0.42
SMOQ99835 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SMOQ99835 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.67■□□□□ 0.42
SMOQ99835 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMOQ99835 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SMOQ99835 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SMOQ99835 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.67■□□□□ 0.42
SMOQ99835 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
SMOQ99835 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMOQ99835 AC022211.2-201ENST00000585075 2527 ntBASIC17.67■□□□□ 0.42
SMOQ99835 AC090340.1-201ENST00000620778 4980 ntBASIC17.67■□□□□ 0.42
SMOQ99835 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMOQ99835 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMOQ99835 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMOQ99835 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMOQ99835 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMOQ99835 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMOQ99835 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMOQ99835 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SMOQ99835 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.67■□□□□ 0.42
SMOQ99835 AC092474.2-201ENST00000424288 719 ntBASIC17.67■□□□□ 0.42
SMOQ99835 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.67■□□□□ 0.42
SMOQ99835 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SMOQ99835 ACTG1P14-201ENST00000446382 1122 ntBASIC17.67■□□□□ 0.42
SMOQ99835 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMOQ99835 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.67■□□□□ 0.42
SMOQ99835 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.67■□□□□ 0.42
SMOQ99835 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.67■□□□□ 0.42
SMOQ99835 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.67■□□□□ 0.42
SMOQ99835 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.67■□□□□ 0.42
SMOQ99835 AC109635.5-201ENST00000533593 962 ntBASIC17.67■□□□□ 0.42
SMOQ99835 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms