Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF2Q99805 REXO1L11P-201ENST00000620964 1927 ntBASIC15.79■□□□□ 0.12
TM9SF2Q99805 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF2Q99805 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.79■□□□□ 0.12
TM9SF2Q99805 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.79■□□□□ 0.12
TM9SF2Q99805 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.79■□□□□ 0.12
TM9SF2Q99805 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.79■□□□□ 0.12
TM9SF2Q99805 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.79■□□□□ 0.12
TM9SF2Q99805 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.79■□□□□ 0.12
TM9SF2Q99805 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.79■□□□□ 0.12
TM9SF2Q99805 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.79■□□□□ 0.12
TM9SF2Q99805 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.79■□□□□ 0.12
TM9SF2Q99805 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.79■□□□□ 0.12
TM9SF2Q99805 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF2Q99805 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TM9SF2Q99805 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF2Q99805 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF2Q99805 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF2Q99805 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF2Q99805 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF2Q99805 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TM9SF2Q99805 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF2Q99805 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TM9SF2Q99805 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF2Q99805 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF2Q99805 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.79■□□□□ 0.12
TM9SF2Q99805 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.79■□□□□ 0.12
TM9SF2Q99805 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF2Q99805 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 AC079328.2-201ENST00000561241 3354 ntBASIC15.78■□□□□ 0.12
TM9SF2Q99805 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.78■□□□□ 0.12
TM9SF2Q99805 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.78■□□□□ 0.12
TM9SF2Q99805 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.78■□□□□ 0.12
TM9SF2Q99805 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TM9SF2Q99805 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TM9SF2Q99805 COX5BP2-201ENST00000392354 334 ntBASIC15.78■□□□□ 0.12
TM9SF2Q99805 AL590627.1-203ENST00000421194 1026 ntBASIC15.78■□□□□ 0.12
TM9SF2Q99805 AC018712.1-201ENST00000455767 687 ntBASIC15.78■□□□□ 0.12
TM9SF2Q99805 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.78■□□□□ 0.12
TM9SF2Q99805 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.78■□□□□ 0.12
TM9SF2Q99805 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.78■□□□□ 0.12
TM9SF2Q99805 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.78■□□□□ 0.12
TM9SF2Q99805 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.78■□□□□ 0.12
TM9SF2Q99805 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.78■□□□□ 0.12
TM9SF2Q99805 AC120114.3-201ENST00000611923 658 ntBASIC15.78■□□□□ 0.12
TM9SF2Q99805 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 LINC02199-201ENST00000506655 2702 ntBASIC15.78■□□□□ 0.12
TM9SF2Q99805 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF2Q99805 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TM9SF2Q99805 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF2Q99805 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF2Q99805 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF2Q99805 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF2Q99805 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF2Q99805 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF2Q99805 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.77■□□□□ 0.12
TM9SF2Q99805 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF2Q99805 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.77■□□□□ 0.12
TM9SF2Q99805 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF2Q99805 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF2Q99805 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TM9SF2Q99805 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF2Q99805 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.12
TM9SF2Q99805 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.77■□□□□ 0.12
TM9SF2Q99805 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF2Q99805 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.77■□□□□ 0.12
TM9SF2Q99805 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.77■□□□□ 0.12
TM9SF2Q99805 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.77■□□□□ 0.12
TM9SF2Q99805 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TM9SF2Q99805 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.77■□□□□ 0.12
TM9SF2Q99805 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF2Q99805 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
TM9SF2Q99805 AP000867.4-201ENST00000641616 219 ntBASIC15.77■□□□□ 0.12
TM9SF2Q99805 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF2Q99805 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF2Q99805 AC010460.3-201ENST00000511359 1579 ntBASIC15.77■□□□□ 0.11
TM9SF2Q99805 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TM9SF2Q99805 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TM9SF2Q99805 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.77■□□□□ 0.11
TM9SF2Q99805 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms