Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.23■□□□□ 0.35
NOTCH4Q99466 AC092068.3-201ENST00000587894 2016 ntBASIC17.23■□□□□ 0.35
NOTCH4Q99466 AC067852.2-201ENST00000590513 2313 ntBASIC17.23■□□□□ 0.35
NOTCH4Q99466 AL132655.2-201ENST00000596276 594 ntBASIC17.23■□□□□ 0.35
NOTCH4Q99466 AC013467.2-201ENST00000605472 835 ntBASIC17.23■□□□□ 0.35
NOTCH4Q99466 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH4Q99466 LINC02012-201ENST00000608206 1725 ntBASIC17.23■□□□□ 0.35
NOTCH4Q99466 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH4Q99466 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH4Q99466 NOC2LP2-201ENST00000407594 1944 ntBASIC17.23■□□□□ 0.35
NOTCH4Q99466 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH4Q99466 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.23■□□□□ 0.35
NOTCH4Q99466 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH4Q99466 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH4Q99466 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.23■□□□□ 0.35
NOTCH4Q99466 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH4Q99466 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.23■□□□□ 0.35
NOTCH4Q99466 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NOTCH4Q99466 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH4Q99466 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH4Q99466 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH4Q99466 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.23■□□□□ 0.35
NOTCH4Q99466 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.23■□□□□ 0.35
NOTCH4Q99466 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH4Q99466 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NOTCH4Q99466 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.23■□□□□ 0.35
NOTCH4Q99466 AC009407.1-201ENST00000568958 598 ntBASIC17.23■□□□□ 0.35
NOTCH4Q99466 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.23■□□□□ 0.35
NOTCH4Q99466 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.23■□□□□ 0.35
NOTCH4Q99466 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH4Q99466 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH4Q99466 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.22■□□□□ 0.35
NOTCH4Q99466 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NOTCH4Q99466 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NOTCH4Q99466 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NOTCH4Q99466 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
NOTCH4Q99466 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NOTCH4Q99466 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NOTCH4Q99466 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NOTCH4Q99466 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NOTCH4Q99466 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NOTCH4Q99466 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
NOTCH4Q99466 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.22■□□□□ 0.35
NOTCH4Q99466 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NOTCH4Q99466 WASH4P-201ENST00000564273 1246 ntBASIC17.22■□□□□ 0.35
NOTCH4Q99466 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.22■□□□□ 0.35
NOTCH4Q99466 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.22■□□□□ 0.35
NOTCH4Q99466 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NOTCH4Q99466 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.22■□□□□ 0.35
NOTCH4Q99466 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NOTCH4Q99466 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.22■□□□□ 0.35
NOTCH4Q99466 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
NOTCH4Q99466 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NOTCH4Q99466 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NOTCH4Q99466 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
NOTCH4Q99466 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.21■□□□□ 0.35
NOTCH4Q99466 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NOTCH4Q99466 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.21■□□□□ 0.35
NOTCH4Q99466 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.21■□□□□ 0.35
NOTCH4Q99466 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.21■□□□□ 0.35
NOTCH4Q99466 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.21■□□□□ 0.35
NOTCH4Q99466 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
NOTCH4Q99466 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
NOTCH4Q99466 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NOTCH4Q99466 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NOTCH4Q99466 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NOTCH4Q99466 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.21■□□□□ 0.35
NOTCH4Q99466 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NOTCH4Q99466 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NOTCH4Q99466 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NOTCH4Q99466 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NOTCH4Q99466 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NOTCH4Q99466 RPL37AP1-201ENST00000412502 279 ntBASIC17.21■□□□□ 0.35
NOTCH4Q99466 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.21■□□□□ 0.35
NOTCH4Q99466 RNA5SP410-201ENST00000516285 106 ntBASIC17.21■□□□□ 0.35
NOTCH4Q99466 AL512361.1-201ENST00000554200 418 ntBASIC17.21■□□□□ 0.35
NOTCH4Q99466 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.21■□□□□ 0.35
NOTCH4Q99466 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.21■□□□□ 0.35
NOTCH4Q99466 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.21■□□□□ 0.35
NOTCH4Q99466 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.21■□□□□ 0.35
NOTCH4Q99466 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.21■□□□□ 0.35
NOTCH4Q99466 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.21■□□□□ 0.35
NOTCH4Q99466 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NOTCH4Q99466 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NOTCH4Q99466 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.21■□□□□ 0.35
NOTCH4Q99466 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NOTCH4Q99466 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
NOTCH4Q99466 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NOTCH4Q99466 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NOTCH4Q99466 KRT8P39-201ENST00000396270 1433 ntBASIC17.2■□□□□ 0.34
NOTCH4Q99466 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NOTCH4Q99466 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NOTCH4Q99466 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.2■□□□□ 0.34
NOTCH4Q99466 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.2■□□□□ 0.34
NOTCH4Q99466 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NOTCH4Q99466 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NOTCH4Q99466 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.2■□□□□ 0.34
NOTCH4Q99466 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.2■□□□□ 0.34
NOTCH4Q99466 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NOTCH4Q99466 AL512638.1-201ENST00000457493 794 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms