Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ALPK3Q96L96 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.16■□□□□ 0.5
ALPK3Q96L96 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
ALPK3Q96L96 NEFHP1-201ENST00000412845 2629 ntBASIC18.16■□□□□ 0.5
ALPK3Q96L96 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ALPK3Q96L96 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.16■□□□□ 0.5
ALPK3Q96L96 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.16■□□□□ 0.5
ALPK3Q96L96 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
ALPK3Q96L96 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ALPK3Q96L96 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ALPK3Q96L96 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.16■□□□□ 0.5
ALPK3Q96L96 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.16■□□□□ 0.5
ALPK3Q96L96 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.16■□□□□ 0.5
ALPK3Q96L96 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.15■□□□□ 0.5
ALPK3Q96L96 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALPK3Q96L96 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.15■□□□□ 0.5
ALPK3Q96L96 MIR8072-201ENST00000614241 80 ntBASIC18.15■□□□□ 0.5
ALPK3Q96L96 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ALPK3Q96L96 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ALPK3Q96L96 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALPK3Q96L96 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ALPK3Q96L96 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.15■□□□□ 0.5
ALPK3Q96L96 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALPK3Q96L96 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALPK3Q96L96 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ALPK3Q96L96 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.15■□□□□ 0.5
ALPK3Q96L96 EGFEM1P-202ENST00000431685 1563 ntBASIC18.15■□□□□ 0.5
ALPK3Q96L96 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.15■□□□□ 0.5
ALPK3Q96L96 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.15■□□□□ 0.5
ALPK3Q96L96 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
ALPK3Q96L96 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ALPK3Q96L96 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ALPK3Q96L96 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
ALPK3Q96L96 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALPK3Q96L96 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALPK3Q96L96 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.15■□□□□ 0.5
ALPK3Q96L96 MIR663B-201ENST00000408361 115 ntBASIC18.15■□□□□ 0.5
ALPK3Q96L96 IGHJ2P-201ENST00000454480 60 ntBASIC18.15■□□□□ 0.5
ALPK3Q96L96 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ALPK3Q96L96 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.15■□□□□ 0.5
ALPK3Q96L96 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.15■□□□□ 0.5
ALPK3Q96L96 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALPK3Q96L96 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
ALPK3Q96L96 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.15■□□□□ 0.5
ALPK3Q96L96 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ALPK3Q96L96 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.15■□□□□ 0.5
ALPK3Q96L96 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
ALPK3Q96L96 AC093525.8-201ENST00000624099 1342 ntBASIC18.15■□□□□ 0.5
ALPK3Q96L96 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
ALPK3Q96L96 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ALPK3Q96L96 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ALPK3Q96L96 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ALPK3Q96L96 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.14■□□□□ 0.49
ALPK3Q96L96 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
ALPK3Q96L96 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ALPK3Q96L96 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ALPK3Q96L96 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.14■□□□□ 0.49
ALPK3Q96L96 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.14■□□□□ 0.49
ALPK3Q96L96 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.14■□□□□ 0.49
ALPK3Q96L96 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.14■□□□□ 0.49
ALPK3Q96L96 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.14■□□□□ 0.49
ALPK3Q96L96 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.14■□□□□ 0.49
ALPK3Q96L96 RNA5SP412-201ENST00000516234 123 ntBASIC18.14■□□□□ 0.49
ALPK3Q96L96 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.14■□□□□ 0.49
ALPK3Q96L96 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ALPK3Q96L96 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ALPK3Q96L96 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.14■□□□□ 0.49
ALPK3Q96L96 AC103810.3-201ENST00000583567 96 ntBASIC18.14■□□□□ 0.49
ALPK3Q96L96 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.14■□□□□ 0.49
ALPK3Q96L96 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ALPK3Q96L96 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.14■□□□□ 0.49
ALPK3Q96L96 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.14■□□□□ 0.49
ALPK3Q96L96 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ALPK3Q96L96 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ALPK3Q96L96 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ALPK3Q96L96 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ALPK3Q96L96 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ALPK3Q96L96 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ALPK3Q96L96 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALPK3Q96L96 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALPK3Q96L96 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALPK3Q96L96 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 FAM21FP-201ENST00000426241 1131 ntBASIC18.13■□□□□ 0.49
ALPK3Q96L96 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 AL391069.4-201ENST00000609583 481 ntBASIC18.13■□□□□ 0.49
ALPK3Q96L96 AC009542.2-202ENST00000619004 1067 ntBASIC18.13■□□□□ 0.49
ALPK3Q96L96 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALPK3Q96L96 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ALPK3Q96L96 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALPK3Q96L96 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms