Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
SMARCD1Q96GM5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
SMARCD1Q96GM5 ELL2P1-201ENST00000413990 1906 ntBASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 ACTG1P14-201ENST00000446382 1122 ntBASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 MIR4469-201ENST00000583919 79 ntBASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 AC055717.3-201ENST00000622967 595 ntBASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.76■□□□□ 0.43
SMARCD1Q96GM5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 RNU1-129P-201ENST00000384064 167 ntBASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 AC211486.1-202ENST00000416371 468 ntBASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 AC211476.1-201ENST00000503899 468 ntBASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 U1.21-201ENST00000580816 167 ntBASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 AC013467.2-201ENST00000605472 835 ntBASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 AC092902.6-201ENST00000641783 218 ntBASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 AC006277.1-201ENST00000624348 1610 ntBASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 LINC00895-201ENST00000629028 1637 ntBASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCD1Q96GM5 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 AC004967.1-201ENST00000453589 447 ntBASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms