Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 HMGA1P5-201ENST00000412453 271 ntBASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 PVRIG2P-201ENST00000435460 978 ntBASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 AC112698.1-201ENST00000510299 916 ntBASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 KRT18P22-201ENST00000402024 1347 ntBASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP6Q96FZ7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 FAM87A-204ENST00000613235 858 ntBASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 FRMD8P1-201ENST00000440433 1524 ntBASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.1■□□□□ 0.33
CHMP6Q96FZ7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms