Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.15■□□□□ 0.82
DDX11Q96FC9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX11Q96FC9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DDX11Q96FC9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX11Q96FC9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX11Q96FC9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX11Q96FC9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX11Q96FC9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX11Q96FC9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX11Q96FC9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX11Q96FC9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DDX11Q96FC9 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX11Q96FC9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
DDX11Q96FC9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
DDX11Q96FC9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.14■□□□□ 0.82
DDX11Q96FC9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.14■□□□□ 0.82
DDX11Q96FC9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
DDX11Q96FC9 AC124067.4-201ENST00000519691 2379 ntBASIC20.14■□□□□ 0.82
DDX11Q96FC9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
DDX11Q96FC9 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX11Q96FC9 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX11Q96FC9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.14■□□□□ 0.81
DDX11Q96FC9 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DDX11Q96FC9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX11Q96FC9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX11Q96FC9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DDX11Q96FC9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX11Q96FC9 RPSAP43-201ENST00000402237 625 ntBASIC20.14■□□□□ 0.81
DDX11Q96FC9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.14■□□□□ 0.81
DDX11Q96FC9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.14■□□□□ 0.81
DDX11Q96FC9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.14■□□□□ 0.81
DDX11Q96FC9 DNAJB3-201ENST00000446806 729 ntBASIC20.14■□□□□ 0.81
DDX11Q96FC9 AC108751.1-201ENST00000490852 363 ntBASIC20.14■□□□□ 0.81
DDX11Q96FC9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.14■□□□□ 0.81
DDX11Q96FC9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX11Q96FC9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX11Q96FC9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX11Q96FC9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX11Q96FC9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX11Q96FC9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX11Q96FC9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX11Q96FC9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX11Q96FC9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX11Q96FC9 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX11Q96FC9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX11Q96FC9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.13■□□□□ 0.81
DDX11Q96FC9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX11Q96FC9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX11Q96FC9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX11Q96FC9 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.13■□□□□ 0.81
DDX11Q96FC9 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
DDX11Q96FC9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX11Q96FC9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX11Q96FC9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX11Q96FC9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX11Q96FC9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX11Q96FC9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX11Q96FC9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
DDX11Q96FC9 GPX1P2-201ENST00000429271 606 ntBASIC20.13■□□□□ 0.81
DDX11Q96FC9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.13■□□□□ 0.81
DDX11Q96FC9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX11Q96FC9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX11Q96FC9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.13■□□□□ 0.81
DDX11Q96FC9 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX11Q96FC9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX11Q96FC9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX11Q96FC9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
DDX11Q96FC9 FLJ38576-201ENST00000623820 2459 ntBASIC20.13■□□□□ 0.81
DDX11Q96FC9 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX11Q96FC9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX11Q96FC9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX11Q96FC9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX11Q96FC9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX11Q96FC9 EGFEM1P-202ENST00000431685 1563 ntBASIC20.12■□□□□ 0.81
DDX11Q96FC9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
DDX11Q96FC9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDX11Q96FC9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX11Q96FC9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX11Q96FC9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX11Q96FC9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX11Q96FC9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDX11Q96FC9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX11Q96FC9 RNF216P1-203ENST00000404404 2427 ntBASIC20.12■□□□□ 0.81
DDX11Q96FC9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX11Q96FC9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.12■□□□□ 0.81
DDX11Q96FC9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX11Q96FC9 AC112482.1-201ENST00000492080 688 ntBASIC20.12■□□□□ 0.81
DDX11Q96FC9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX11Q96FC9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.12■□□□□ 0.81
DDX11Q96FC9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
DDX11Q96FC9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.12■□□□□ 0.81
DDX11Q96FC9 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX11Q96FC9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDX11Q96FC9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX11Q96FC9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
DDX11Q96FC9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX11Q96FC9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
DDX11Q96FC9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX11Q96FC9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDX11Q96FC9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms