Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC97Q96F63 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC97Q96F63 RPS2P28-201ENST00000314255 741 ntBASIC17.37■□□□□ 0.37
CCDC97Q96F63 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC97Q96F63 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC97Q96F63 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC97Q96F63 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC97Q96F63 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC97Q96F63 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC97Q96F63 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC97Q96F63 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC97Q96F63 AC106730.1-201ENST00000566722 1090 ntBASIC17.37■□□□□ 0.37
CCDC97Q96F63 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC97Q96F63 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC97Q96F63 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC97Q96F63 TP73-AS1-207ENST00000624167 988 ntBASIC17.37■□□□□ 0.37
CCDC97Q96F63 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC97Q96F63 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC97Q96F63 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC97Q96F63 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC97Q96F63 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC97Q96F63 ZNF259P1-201ENST00000407656 1365 ntBASIC17.37■□□□□ 0.37
CCDC97Q96F63 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC97Q96F63 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC97Q96F63 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC97Q96F63 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC97Q96F63 AL353593.2-201ENST00000602529 1483 ntBASIC17.37■□□□□ 0.37
CCDC97Q96F63 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC97Q96F63 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC97Q96F63 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CCDC97Q96F63 AC148477.5-201ENST00000625164 1645 ntBASIC17.36■□□□□ 0.37
CCDC97Q96F63 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC97Q96F63 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC97Q96F63 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC97Q96F63 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC97Q96F63 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC97Q96F63 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCDC97Q96F63 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC97Q96F63 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC97Q96F63 RNA5SP419-201ENST00000515908 135 ntBASIC17.36■□□□□ 0.37
CCDC97Q96F63 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC97Q96F63 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC97Q96F63 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC97Q96F63 TERC-201ENST00000602385 541 ntBASIC17.36■□□□□ 0.37
CCDC97Q96F63 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC97Q96F63 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC97Q96F63 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC97Q96F63 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC97Q96F63 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC97Q96F63 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC97Q96F63 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC97Q96F63 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CCDC97Q96F63 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC97Q96F63 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 AC004817.3-201ENST00000602957 2129 ntBASIC17.35■□□□□ 0.37
CCDC97Q96F63 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 AC002558.1-201ENST00000488906 803 ntBASIC17.35■□□□□ 0.37
CCDC97Q96F63 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.35■□□□□ 0.37
CCDC97Q96F63 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC97Q96F63 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CCDC97Q96F63 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC97Q96F63 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC97Q96F63 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC97Q96F63 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms