Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 FAM197Y8-203ENST00000450145 560 ntBASIC17.46■□□□□ 0.39
HDAC11Q96DB2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
HDAC11Q96DB2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 PTCHD3P3-201ENST00000403073 906 ntBASIC17.45■□□□□ 0.38
HDAC11Q96DB2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 AL031008.1-201ENST00000619963 541 ntBASIC17.45■□□□□ 0.38
HDAC11Q96DB2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 AF228730.7-201ENST00000641842 219 ntBASIC17.45■□□□□ 0.38
HDAC11Q96DB2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC11Q96DB2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 AGGF1P2-201ENST00000426656 2106 ntBASIC17.44■□□□□ 0.38
HDAC11Q96DB2 PCDHB17P-201ENST00000539533 2393 ntBASIC17.44■□□□□ 0.38
HDAC11Q96DB2 AL021920.2-201ENST00000624828 1351 ntBASIC17.44■□□□□ 0.38
HDAC11Q96DB2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 AC073621.1-201ENST00000392730 636 ntBASIC17.44■□□□□ 0.38
HDAC11Q96DB2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 AF186996.4-201ENST00000467186 377 ntBASIC17.44■□□□□ 0.38
HDAC11Q96DB2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 AP002490.2-201ENST00000524791 560 ntBASIC17.44■□□□□ 0.38
HDAC11Q96DB2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 AC008735.5-201ENST00000623544 497 ntBASIC17.44■□□□□ 0.38
HDAC11Q96DB2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.44■□□□□ 0.38
HDAC11Q96DB2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC11Q96DB2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.43■□□□□ 0.38
HDAC11Q96DB2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HDAC11Q96DB2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
HDAC11Q96DB2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC11Q96DB2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC11Q96DB2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC11Q96DB2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.43■□□□□ 0.38
HDAC11Q96DB2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.43■□□□□ 0.38
HDAC11Q96DB2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms