Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.34■□□□□ 0.21
VPS33AQ96AX1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
VPS33AQ96AX1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS33AQ96AX1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
VPS33AQ96AX1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS33AQ96AX1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS33AQ96AX1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS33AQ96AX1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS33AQ96AX1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS33AQ96AX1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
VPS33AQ96AX1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS33AQ96AX1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
VPS33AQ96AX1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS33AQ96AX1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS33AQ96AX1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS33AQ96AX1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS33AQ96AX1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
VPS33AQ96AX1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
VPS33AQ96AX1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
VPS33AQ96AX1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VPS33AQ96AX1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
VPS33AQ96AX1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VPS33AQ96AX1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.33■□□□□ 0.2
VPS33AQ96AX1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS33AQ96AX1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 AC003669.1-201ENST00000334569 611 ntBASIC16.32■□□□□ 0.2
VPS33AQ96AX1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 KLF4P1-201ENST00000412782 1185 ntBASIC16.32■□□□□ 0.2
VPS33AQ96AX1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 AC103702.1-201ENST00000548801 2630 ntBASIC16.32■□□□□ 0.2
VPS33AQ96AX1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS33AQ96AX1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms