Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.75■□□□□ 0.43
USP13Q92995 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.75■□□□□ 0.43
USP13Q92995 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.75■□□□□ 0.43
USP13Q92995 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
USP13Q92995 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP13Q92995 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP13Q92995 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP13Q92995 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP13Q92995 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP13Q92995 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
USP13Q92995 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.75■□□□□ 0.43
USP13Q92995 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP13Q92995 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP13Q92995 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.75■□□□□ 0.43
USP13Q92995 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP13Q92995 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP13Q92995 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP13Q92995 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP13Q92995 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP13Q92995 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP13Q92995 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP13Q92995 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP13Q92995 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.74■□□□□ 0.43
USP13Q92995 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
USP13Q92995 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.74■□□□□ 0.43
USP13Q92995 AP000344.2-201ENST00000512987 629 ntBASIC17.74■□□□□ 0.43
USP13Q92995 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.74■□□□□ 0.43
USP13Q92995 RFPL4AP1-201ENST00000530883 850 ntBASIC17.74■□□□□ 0.43
USP13Q92995 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.74■□□□□ 0.43
USP13Q92995 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.74■□□□□ 0.43
USP13Q92995 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP13Q92995 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.74■□□□□ 0.43
USP13Q92995 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP13Q92995 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
USP13Q92995 AC108860.2-201ENST00000562760 2183 ntBASIC17.74■□□□□ 0.43
USP13Q92995 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP13Q92995 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.74■□□□□ 0.43
USP13Q92995 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP13Q92995 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
USP13Q92995 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP13Q92995 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP13Q92995 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
USP13Q92995 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP13Q92995 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
USP13Q92995 AC084018.2-201ENST00000613093 2607 ntBASIC17.73■□□□□ 0.43
USP13Q92995 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP13Q92995 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP13Q92995 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP13Q92995 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP13Q92995 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
USP13Q92995 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP13Q92995 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP13Q92995 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP13Q92995 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.73■□□□□ 0.43
USP13Q92995 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.73■□□□□ 0.43
USP13Q92995 AC107918.2-201ENST00000530817 355 ntBASIC17.73■□□□□ 0.43
USP13Q92995 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
USP13Q92995 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.73■□□□□ 0.43
USP13Q92995 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.73■□□□□ 0.43
USP13Q92995 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.73■□□□□ 0.43
USP13Q92995 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP13Q92995 REXO1L3P-201ENST00000622202 1288 ntBASIC17.73■□□□□ 0.43
USP13Q92995 AL513210.1-201ENST00000629608 234 ntBASIC17.73■□□□□ 0.43
USP13Q92995 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP13Q92995 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP13Q92995 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP13Q92995 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.73■□□□□ 0.43
USP13Q92995 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.73■□□□□ 0.43
USP13Q92995 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP13Q92995 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP13Q92995 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.73■□□□□ 0.43
USP13Q92995 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP13Q92995 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP13Q92995 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP13Q92995 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.72■□□□□ 0.43
USP13Q92995 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP13Q92995 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
USP13Q92995 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP13Q92995 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
USP13Q92995 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP13Q92995 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP13Q92995 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP13Q92995 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP13Q92995 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP13Q92995 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
USP13Q92995 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP13Q92995 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP13Q92995 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP13Q92995 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP13Q92995 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
USP13Q92995 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
USP13Q92995 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.72■□□□□ 0.43
USP13Q92995 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP13Q92995 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP13Q92995 CYMP-203ENST00000474680 1263 ntBASIC17.72■□□□□ 0.43
USP13Q92995 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.72■□□□□ 0.43
USP13Q92995 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.72■□□□□ 0.43
USP13Q92995 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
USP13Q92995 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.72■□□□□ 0.43
USP13Q92995 AC105339.1-204ENST00000636249 355 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms